| A systematic review of genetic skeletal disorders reported in Chinese biomedical journals between 1978 and 2012. | |
| | |
| Jump to Full Text | |
MedLine Citation:
|
PMID: 22913777 Owner: NLM Status: Publisher |
Abstract/OtherAbstract:
|
ABSTRACT: Little information is available on the prevalence, geographic distribution and mutation spectrum of genetic skeletal disorders (GSDs) in China. This study systematically reviewed GSDs as defined in "Nosology and Classification of genetic skeletal disorders (2010 version)" using Chinese biomedical literature published over the past 34 years from 1978 to 2012. In total, 16,099 GSDs have been reported. The most frequently reported disorders were Marfan syndrome, osteogenesis imperfecta, fibrous dysplasia, mucopolysaccharidosis, multiple cartilaginous exostoses, neurofibromatosis type 1 (NF1), osteopetrosis, achondroplasia, enchondromatosis (Ollier), and osteopoikilosis, accounting for 76.5% (12,312 cases) of the total cases. Five groups (group 8, 12, 14, 18, 21) defined by "Nosology and Classification of genetic skeletal disorders" have not been reported in the Chinese biomedical literature. Gene mutation testing was performed in only a minor portion of the 16,099 cases of GSDs (187 cases, 1.16%). In total, 37 genes for 41 different GSDs were reported in Chinese biomedical literature, including 43 novel mutations. This review revealed a significant imbalance in rare disease identification in terms of geographic regions and hospital levels, suggesting the need to create a national multi-level network to meet the specific challenge of care for rare diseases in China. |
| | |
Authors:
|
Yazhou Cui; Heng Zhao; Zhenxing Liu; Chao Liu; Jing Luan; Xiaoyan Zhou; Jinxiang Han |
Related Documents
:
|
22915347 - Meningitis caused by abiotrophia defectiva: case report and literature review. 22550607 - Chronic postoperative endophthalmitis: a review of clinical characteristics, microbiolo... 11555337 - Kahlbaum's catatonia revisited. 16260927 - Rosenhan revisited: the scientific credibility of lauren slater's pseudopatient diagnos... 1126257 - Atraumatic splenic rupture simulating ruptured sigmoid diverticulitis: report of a case... 7380157 - Recurrent enteric gallstone obstruction. |
Publication Detail:
|
Type: JOURNAL ARTICLE Date: 2012-8-22 |
Journal Detail:
|
Title: Orphanet journal of rare diseases Volume: 7 ISSN: 1750-1172 ISO Abbreviation: Orphanet J Rare Dis Publication Date: 2012 Aug |
Date Detail:
|
Created Date: 2012-8-23 Completed Date: - Revised Date: - |
Medline Journal Info:
|
Nlm Unique ID: 101266602 Medline TA: Orphanet J Rare Dis Country: - |
Other Details:
|
Languages: ENG Pagination: 55 Citation Subset: - |
Export Citation:
|
APA/MLA Format Download EndNote Download BibTex |
| MeSH Terms | |
Descriptor/Qualifier:
|
|
| Full Text | |
|
Journal Information Journal ID (nlm-ta): Orphanet J Rare Dis Journal ID (iso-abbrev): Orphanet J Rare Dis ISSN: 1750-1172 Publisher: BioMed Central |
Article Information Download PDF ![]() Copyright ©2012 Cui et al.; licensee BioMed Central Ltd. open-access: Received Day: 27 Month: 3 Year: 2012 Accepted Day: 20 Month: 8 Year: 2012 collection publication date: Year: 2012 Electronic publication date: Day: 22 Month: 8 Year: 2012 Volume: 7First Page: 55 Last Page: 55 PubMed Id: 22913777 ID: 3492206 Publisher Id: 1750-1172-7-55 DOI: 10.1186/1750-1172-7-55 |
| A systematic review of genetic skeletal disorders reported in Chinese biomedical journals between 1978 and 2012 | |
| Yazhou Cui12 | Email: cuiyazhou@yahoo.com.cn |
| Heng Zhao12 | Email: zhaoheng1224@163.com |
| Zhenxing Liu12 | Email: zijian2311@163.com |
| Chao Liu12 | Email: 15266570735@126.com |
| Jing Luan12 | Email: yimu1140@126.com |
| Xiaoyan Zhou12 | Email: yan19850923@126.com |
| Jinxiang Han12 | Email: samshjx@sina.com |
|
1Shandong Academy of Medical Sciences, Shandong Medical Biotechnological Center, Jinan, 250062, China |
|
|
2Key Laboratory for Biotech Drugs of the Ministry of Health, Key Laboratory for Rare Disease Research of Shandong Province, Jinan, 250062, China |
|
Genetic skeletal disorders (GSDs) arise from disturbances of the complex processes of skeletal development, growth, and homeostasis caused by gene mutations. These disorders represent a challenge in terms of diagnosis and treatment due to their rarity and variety [1,2]. The recently published “Nosology and Classification of Genetic skeletal disorders (2010 version)” listed 456 GSDs that were classified into 40 groups by clinical, radiographic, and molecular criteria; of these, 316 conditions were associated with mutations in 226 different genes [3]. The Nosology not only provides a guideline for the diagnosis of the patients and the recognition of the novel disorders for clinicians, but also is helpful for better understanding the mechanisms of genes, proteins and pathways involved in skeletal biology.
Until now, population-based studies to determine the prevalence of GSDs have been not been performed in China. Most GSDs have been reported in “case reports” in Chinese biomedical literature, but these sources are usually not available to international readers. Therefore, an introduction to the published literature on GSDs in China would enrich our knowledge on the prevalence and molecular characteristics of these rare diseases.
This study systematically reviewed GSDs reported in Chinese biomedical literature published over the past 34 years from January 1978 to January 2012. This study also analyzed the current state and specific challenges in diagnosing and treating rare diseases in China.
This bibliographic study covered a total of 456 GSDs in 40 groups defined in “Nosology and Classification of GSDs (2010 version).” This study has been performed with the approval of the ethics committee of Shandong Academy of Medical Science.
A literature search was conducted using China Biomedical Database (CBM) ( http://sinomed.imicams.ac.cn) and covered sources from January 1978 to January 2012. The CBM is the largest Chinese biomedical bibliographic database [4], and includes a total of 6,840,907 articles from more than 1,600 biomedical journals published in Chinese prior to January 12, 2012.
The CBM database and public web search engines were first used to search for alternative Chinese terms for the English terms describing each disorder, and then all the terms for the disorder (both in English and Chinese) were used to search for publications in the CBM database. English terms for disorders were included since most Chinese biomedical articles contain an English abstract. The following search algorithm was used: “English disorder terms OR Chinese disorder terms [fulltext]”. For diseases with different subtypes (for example, Osteogenesis Imperfecta, types I–V), only the main term (“Osteogenesis Imperfecta”) was used in the search, and information on the type was gleaned from the text.
Clinical data and diagnostic information were gleaned from the abstract or full text of the articles searched for in the CBM database. Cases of GSDs with a confirmed diagnosis were included. Detailed clinical, imaging, and laboratory data needed to be described for case reports. Exact diagnostic criteria had to be included for research reports involving multiple cases or families. For each study included, informed consent to publication was obtained from the patient. Patient medical information was carefully compared for series of reports on the same disorders by the same authors or institutions, and redundant cases were excluded.
According to our criteria 3,208 Chinese reports were qualified for inclusion. A total of 16,099 cases of GSDs in 35 groups of the “Nosology and Classification of Genetic Skeletal Disorders (2010 version)” was reported in the literature. The number of published cases is listed in Table 1. The 10 most frequently reported GSDs were Marfan syndrome, osteogenesis imperfecta, fibrous dysplasia, mucopolysaccharidosis, multiple cartilaginous exostoses, neurofibromatosis type 1 (NF1), osteopetrosis, achondroplasia, enchondromatosis (Ollier), and osteopoikilosis, accounting for 76.5% of cases (12,312 cases). Five groups (group 8 TRPV4 group, group 12 spondylometaphyseal dysplasias, group 14 severe spondylodysplastic dysplasias, group 18 bent bones dysplasias, and group 21 chondrodysplasia punctata) described in the Nosology have not been reported yet by Chinese biomedical literature.
The geographic distribution of cases is shown in Figure 1. GSDs have been reported in all of China’s provinces and province-level municipalities. However, the number of cases varied geographically. More patients were reported in the East and South of China, which have a higher population density and better medical services than other areas. Beijing, Guangdong, Shandong, Shanghai and Jiangsu ranked among the top 5 provinces or province-level municipalities where disorders were reported.
As shown in Figure 2, the number of patients with GSDs reported each year in the CBM database increased gradually since 1978 and rapidly increased starting in 1994. Most GSD cases were reported by pediatricians, radiologists, and orthopedists. 49.0% of the cases were diagnosed at a university hospital,10.8% were diagnosed at a provincial hospital, 32.7% were diagnosed at a municipal hospital, and the remainder (7.5%) was diagnosed at hospitals on country level or even from smaller communities. (Figure 3).
Gene mutations were evaluated in 187 cases or families out of 16,099 total reported cases, accounting for only a minor portion (1.16%). As shown in Table 2, a total of 37 genes for 41 different GSDs were reported, including 43 novel mutations that have not been reported before. The EXT1 and EXT2 genes (30 cases) for multiple cartilaginous exostoses, the FBN1 gene for Marfan syndrome (24 cases), and the FGFR3 gene for achondroplasia (22 cases) were most frequently reported in Chinese biomedical literature from the CBM database. Compared to the reported geographic distribution of GSDs (Figure 2), genetic testing was only performed at university hospitals in a few areas (Figure 4). Affiliated hospitals of Shanghai Jiaotong University, Chinese Academy Of Medical Science & Peking Union Medical College, Zhongshan University, Central South University, and Peking University rank the top 5 University hospitals which performed most gene testing of GSDs.
As the world’s most densely populated nation, China has the world’s largest number of rare disease groups [5]. In 1984, the concept of rare diseases was introduced in China. Until recently, however, the problem presented by rare diseases has received little attention [6]. Currently, there is no case registration system for most rare diseases, so there is very little documented information on the epidemiology of those diseases in China [7]. China still lacks an official definition and spectrum of rare diseases.
A bibliographic study will help to estimate the prevalence of rare diseases [8]. Most rare diseases have been reported in Chinese biomedical publications. Presently, only 86 Chinese biomedical journals have abstracts in English included in Pubmed [9]. Therefore, most reports on rare diseases in China are unavailable to international readers. To our knowledge, the current study is the first systematic review of the Chinese biomedical literature on rare disease groups.
GSDs are representative for many other groups of rare diseases. The current systematic review found that the number and type of GSDs reported in Chinese biomedical literature increased gradually over the past 30 years. In the last 5 years in particular, there were 1,057 cases reported annually, which is due to the rapid improvement of general healthcare and increasing attention to the medical problems caused by rare diseases in China. Although most genetic skeletal disease groups have been reported in Chinese biomedical literature, but only a small portion of patients were exactly molecularly characterized. For example, 1,314 cases of osteogenesis imperfecta were reported in the CBM database but in only 5% the exact type has been determined. This situation might be mainly due to the fact that most of these patients were diagnosed based on clinical and radiographic criteria and because gene mutation testing has been unavailable at most hospitals until now. In only 1% of all cases with GSDs a causative gene mutation was identified. Among these reported mutations, there is a relatively high frequency of novel mutations. These novel variations may also lead to a better understanding of the mutation spectrum and impact of genes associated with GSDs. For example, 5 cases of novel mutations in COL1A1 have been reported in Chinese biomedical literature. Among them, 4 cases belong to glycine single base substitution mutations in the triple-helical region (p.G632x, p.G1157D) and splicing sites (IVS27 + 1 G > A, IVS8-2A > G), which are the most and second common mutation types in COL1A1 gene. Mutations in the C-propeptide coding region have been identified less frequent than other forms of mutation. D1441 is one of a few residues absolutely conserved in this region, a previous study reported a defect in this site (D1441Y) resulting in a lethal variant of osteogenesis imperfecta with features of dense bone diseases [10], however, a novel mutation in this site described in a Chinese family (D1441H) led to only mild osteogenesis imperfecta (type 1), which suggesting mutations in this region show great heterogeneity in clinical outcome.
This systematic review of genetic skeletal diseases also revealed that reporting of rare diseases varies significantly in different regions and medical resources available in China. Cases of rare diseases were more frequently reported in large municipalities such as Beijing and Shanghai instead of areas with a larger population but a relatively lower level of development such as Sichuan and Henan Provinces. Country level hospitals and below are mainly responsible for treating rural residents and represent more than 70% of the medical resources in China [11]. In this review, we found that only 7.5% of the cases of rare diseases were diagnosed by these hospitals, which is significantly lower than that diagnosed by urban hospitals. In actuality, there are also significant disparities in health care between university hospitals and provincial and municipal hospitals. Currently, gene mutation testing for genetic rare diseases in China is done only by university hospitals in several key municipalities.
We further compared the number of GSD cases reported in Chinese biomedical literature with those of published cases or estimated prevalence of these diseases in Europe from bibliographic data issued by Orphanet [8] (Table 1). Generally, the number of GSDs reported in Chinese biomedical literatures is lower than in Europe, but, with some exceptions, the proportions between the different entities are similar. One of these exceptions are the multiple epiphyseal dysplasias, whose frequency in Europe is 5/100,000, while only a total of 122 cases were reported in Chinese biomedical literature in the past 34 years. Although publication bias and genetic differences between Caucasian and Asian people may exist, we think this discrepancy is mainly due to the fact that China is still lagging behind Europe in terms of the medical resources for these rare diseases, especially in the widespread underdeveloped regions and hospitals on basic levels, therefore, many patients with genetic skeletal disorders could not acquire proper and timely diagnosis in China.
Creating a network for rare diseases is an important medical policy that should significantly reduce misdiagnosis and improve the level of treatment. A network for collaboration with national medical resources has been set up in countries and regions such as Europe, North America, and Japan [12,13]. A number of centers offering counseling on rare diseases have been established in major Chinese cities and several provinces, but a national network has yet to be created. Given the fact that there is a huge gap in terms of medical services in different areas and hospital levels of China, a stronger network of diagnosis and treatment including all levels of hospitals across the country should be created to improve healthcare for rare diseases in the future.
In conclusion, this systematic review summarized the number, geographic and genetic characteristics of GSDs in Chinese biomedical publications. Analyzing number of the diseases revealed an imbalance in the distribution of areas and hospitals diagnosing rare diseases, which suggests that a multi-level network should be created to meet the specific challenge of healthcare for rare diseases in China.
The authors declare that they have no competing interests.
JH and YC put forward the idea and designed the key points. YC was responsible for the article writing and data analysis. HZ, ZL and CL were responsible for the data collection. HZ, JL and XZ participated in data analysis. All authors read and approved the final manuscript.
References
| Zelzer E,Olsen BR,The genetic basis for skeletal diseasesNatureYear: 200342334334810.1038/nature0165912748653 | |
| Makitie O,Molecular defects causing skeletal dysplasiasEndocr DevYear: 201121788421865756 | |
| Warman ML,Cormier-Daire V,Hall C,Krakow D,Lachman R,LeMerrer M,Mortier G,Mundlos S,Nishimura G,Rimoin DL,et al. Nosology and classification of genetic skeletal disorders: 2010 revisionAm J Med Genet AYear: 2011155A94396821438135 | |
| Xia J,Wright J,Adams CE,Five large Chinese biomedical bibliographic databases: accessibility and coverageHealth Info Libr JYear: 200825556110.1111/j.1471-1842.2007.00734.x18251914 | |
| Wang JB,Guo JJ,Yang L,Zhang YD,Sun ZQ,Zhang YJ,Rare diseases and legislation in ChinaLancetYear: 201037570870910.1016/S0140-6736(10)60240-120189012 | |
| Han JX,Cui YZ,Zhou XY,Rare diseases research in China: Opportunities, challenges, and solutionsIntractable Rare Dis ResYear: 201211012 | |
| Zhang YJ,Wang YO,Li L,Guo JJ,Wang JB,China’s first rare-disease registry is under developmentLancetYear: 201137876977010.1016/S0140-6736(11)61375-521872747 | |
| Aymé S,Gonthier C,Prevalence of rare diseases: Bibliographic dataOrphanet Report Series, Rare Diseases collectionYear: 20111129 | |
| Zhou QH,Ling CQ,Bai YJ,Yin HX,Journal selection and indexing for Index Medicus and Chinese periodicals indexed in Index MedicusZhong Xi Yi Jie He Xue BaoYear: 20053707815644169 | |
| Pace JM,Chitayat D,Atkinson M,Wilcox WR,Schwarze U,Byers PH,A single amino acid substitution (D1441Y) in the carboxyl-terminal propeptide of the proalpha1(I) chain of type I collagen results in a lethal variant of osteogenesis imperfecta with features of dense bone diseasesJ Med GenetYear: 200239232910.1136/jmg.39.1.2311826020 | |
| Liu Y,China’s public health-care system: facing the challengesBull World Health OrganYear: 20048253253815500285 | |
| Ayme S,Schmidtke J,Networking for rare diseases: a necessity for EuropeBundesgesundheitsblatt Gesundheitsforschung GesundheitsschutzYear: 2007501477148310.1007/s00103-007-0381-918026888 | |
| Black AP,Baker M,The impact of parent advocacy groups, the Internet, and social networking on rare diseases: the IDEA League and IDEA League United Kingdom exampleEpilepsiaYear: 201152Suppl 210210421463291 |
Figures
Tables
Number of published cases of genetic skeletal diseases in Chinese and Europe biomedical literature listed in alphabetical order of diseases*
| Diseases or group of diseases | Number of Cases reported in Chinese biomedical literature | Number of published cases in Europe[8] | Estimated prevalence in Europe (/100,000)[8] |
|---|---|---|---|
| Achondroplasia
|
685
|
|
4.5
|
| Acrofacial dysostosis, Nager type
|
3
|
90
|
|
| alpha-Mannosidosis
|
1
|
|
0.1
|
| Apert syndrome
|
16
|
|
1.25
|
| Asphyxiating thoracic dysplasia
|
45
|
150
|
|
| Brachydactyly
|
88
|
80
|
|
| Caffey disease
|
280
|
N.A.
|
|
| Calcium pyrophosphate deposition disease (familial chondrocalcinosis) type 2
|
1
|
N.A.
|
|
| Cartilage-hair hypoplasia (CHH; metaphyseal dysplasia,McKusick type)
|
3
|
N.A.
|
|
| Cherubism
|
105
|
N.A.
|
|
| Chondrodysplasia punctata
|
7
|
|
0.5
|
| Chondroectodermal dysplasia (Ellis–van Creveld)
|
11
|
150
|
|
| Cleidocranial dysplasia
|
260
|
N.A
|
|
| Congenital contractural arachnodactyly
|
7
|
N.A.
|
|
| Craniofrontonasal syndrome
|
1
|
3
|
|
| Craniometaphyseal dysplasia
|
4
|
70
|
|
| Craniostenosis (Craniosynostosis)
|
302
|
72
|
|
| Crouzon syndrome
|
161
|
|
2
|
| Currarino triad
|
31
|
|
1
|
| de Lange syndrome
|
7
|
|
1.9
|
| Diaphyseal dysplasia Camurati-Engelmann
|
14
|
200
|
|
| Dysplasia epiphysealis hemimelica (Trevor)
|
53
|
N.A.
|
|
| Ectrodactyly-ectodermal dysplasia cleft-palate syndrome
|
5
|
N.A.
|
|
| Ehlers–Danlos syndrome
|
57
|
|
0.2
|
| Enchondromatosis (Ollier)
|
369
|
600
|
|
| Enchondromatosis with hemangiomata (Maffucci)
|
80
|
250
|
|
| Endosteal hyperostosis, van Buchem type
|
8
|
N.A.
|
|
| Familial expansile osteolysis
|
1
|
N.A.
|
|
| Familial hip dysplasia (Beukes)
|
45
|
N.A.
|
|
| Familial osteochondritis dissecans
|
1
|
N.A.
|
|
| Fanconi anemia
|
107
|
|
0.3
|
| Fibrous dysplasia, polyostotic form
|
982
|
|
<50
|
| Frontometaphyseal dysplasia
|
1
|
<30
|
|
| Frontonasal dysplasia
|
4
|
N.A.
|
|
| Fucosidosis
|
1
|
100
|
|
| Fuhrmann syndrome
|
1
|
11
|
|
| GM1 Gangliosidosis, several forms
|
7
|
N.A.
|
|
| Grebe dysplasia
|
2
|
N.A.
|
|
| Greig cephalopolysyndactyly syndrome
|
2
|
100
|
|
| Hajdu–Cheney syndrome
|
7
|
N.A.
|
|
| Hallermann–Streiff syndrome
|
32
|
<100
|
|
| Hanhart syndrome(hypoglossia-hypodactylia)
|
1
|
<50
|
|
| Holt-Oram syndrome
|
218
|
|
1
|
| Hypertrophic osteoarthropathy
|
36
|
N.A.
|
|
| Hypochondroplasia
|
3
|
|
3.3
|
| Hypophosphatasia, perinatal lethal and infantile forms
|
19
|
N.A.
|
|
| Hypophosphatemic rickets
|
43
|
<100
|
|
| Idiopathic juvenile osteoporosis
|
1
|
5
|
|
| Immuno-osseous dysplasia (Schimke)
|
3
|
50
|
|
| Infantile systemic hyalinosis/Juvenile hyaline fibromatosis (ISH/JHF)
|
3
|
N.A.
|
|
| Klippel-Feil anomaly with laryngeal malformation
|
318
|
|
2
|
| Kniest dysplasia
|
1
|
2
|
|
| Langer type (Homozygous dyschondrosteosis)
|
2
|
N.A.
|
|
| Larsen syndrome
|
9
|
100
|
|
| Lipomembraneous osteodystrophy with leukoencephalopathy (presenile dementia with bone cysts; Nasu–Hakola)
|
2
|
|
0.15
|
| Mandibulo-facial dysostosis(Treacher-Collins, Franceschetti-Klein)
|
198
|
|
6
|
| Marfan syndrome
|
5064
|
|
20
|
| Marshall syndrome
|
2
|
63
|
|
| Meckel syndrome
|
35
|
|
2.5
|
| Melorheostosis
|
153
|
300
|
|
| Melorheostosis with osteopoikilosis
|
6
|
N.A.
|
|
| Mesomelic dysplasia
|
4
|
2
|
|
| Metaphyseal dysplasia, Jansen type
|
3
|
16
|
|
| Metaphyseal dysplasia, Schmid type (MCS)
|
53
|
N.A.
|
|
| Mucolipidosis II (I-cell disease),alpha/beta type
|
2
|
|
0.15
|
| Mucopolysaccharidosis
|
958
|
|
3.56
|
| Multicentric carpal-tarsal osteolysis with and without nephropathy
|
2
|
<10
|
|
| Multiple cartilaginous exostoses
|
911
|
|
2
|
| Multiple epiphyseal dysplasia
|
122
|
|
5
|
| Multiple sulfatase deficiency
|
1
|
50
|
|
| Multiple synostoses syndrome
|
1
|
20
|
|
| Nail-patella syndrome
|
61
|
|
2
|
| Neonatal hyperparathyroidism, severe form
|
4
|
N.A.
|
|
| Neurofibromatosis type 1 (NF1)
|
881
|
|
25
|
| Oculodentoosseous dysplasia
|
8
|
243
|
|
| Omodysplasia
|
1
|
30
|
|
| Oral-facial-digital syndrome
|
15
|
|
1.2
|
| Osteoectasia with hyperphosphatasia (juvenile Paget disease)
|
4
|
50
|
|
| Osteogenesis imperfecta
|
1314
|
|
6.5
|
| Osteopetrosis
|
810
|
|
1.75
|
| Osteopoikilosis
|
338
|
300
|
|
| Pachydermoperiostosis (hypertrophic osteoarthropathy,primary, autosomal dominant)
|
25
|
204
|
|
| Pallister-Hall syndrome
|
1
|
100
|
|
| Parietal foramina
|
11
|
|
5
|
| Pfeiffer syndrome
|
4
|
|
1
|
| Poland anomaly
|
27
|
3
|
|
| Preaxial polydactyly
|
16
|
|
25
|
| Progeria, Hutchinson–Gilford type
|
20
|
|
0.005
|
| Progressive osseous heteroplasia
|
20
|
N.A.
|
|
| Progressive pseudorheumatoid dysplasia (PPRD; SED with progressive arthropathy)
|
6
|
N.A.
|
|
| Proteus syndrome
|
22
|
200
|
|
| Proximal symphalangism
|
15
|
N.A.
|
|
| Pseudoachondroplasia (PSACH)
|
51
|
|
1.6
|
| Pyknodysostosis
|
14
|
|
0.13
|
| Pyle disease
|
2
|
<30
|
|
| Radio-ulnar synostosis
|
55
|
<20
|
|
| Saethre–Chotzen syndrome
|
1
|
|
3
|
| Schwartz–Jampel syndrome (myotonic chondrodystrophy)
|
4
|
100
|
|
| SED tarda, X-linked (SED-XL)
|
156
|
|
0.55
|
| SED, Wolcott–Rallison type
|
1
|
<60
|
|
| Short rib-polydactyly syndrome
|
57
|
N.A.
|
|
| Shprintzen-Goldberg syndrome
|
1
|
<50
|
|
| Sotos syndrome
|
38
|
|
7
|
| Split hand-foot malformation
|
25
|
|
1.1
|
| Spondylocostal dysostosis
|
1
|
4
|
|
| Spondyloepiphyseal dysplasia congenita (SEDC)
|
50
|
|
0.34
|
| Spondylometaphyseal dysplasia
|
6
|
|
1
|
| Spondylometaphyseal dysplasia, Kozlowski type
|
2
|
|
0.1
|
| Sterile multifocal osteomyelitis,periostitis, and pustulosis (CINCA/NOMID-like)
|
1
|
N.A.
|
|
| Stickler syndrome
|
7
|
|
13.5
|
| Syndactyly type 5 (HOXD13)
|
7
|
N.A.
|
|
| Thanatophoric dysplasia
|
28
|
|
3.5
|
| Thrombocytopenia-absent radius
|
1
|
N.A.
|
|
| Tibial hemimelia
|
2
|
|
0.1
|
| Trichorhinophalangeal dysplasia | 15 | >100 |
*: Different types belong to one diseases have been combined as one item when the typing information was not provided in literature.
Gene mutation of genetic skeletal disorders published in Chinese biomedical literature from 1978 to 2012*
| Gene | Name of disorder | MIM No. | No. of case reported* | Mutation | Location | Type | Novel |
|---|---|---|---|---|---|---|---|
| ACVR1
|
Fibrodysplasia ossificans progressiva (FOP)
|
135100
|
2
|
c.617 G > A (p.R206H)
|
exon 4
|
missense
|
|
|
|
|
|
1
|
c.1067 G > A (p.G356D)
|
exon 7
|
missense
|
|
| ALPL
|
Hypophosphatasia, infantile forms
|
241500
|
1
|
c.18delA and c.G407C (p.V7Yfs18X and p.R136P)
|
exon 2 and 5
|
nonsense and missense
|
yes
|
| ALPL
|
Hypophosphatasia, adult form
|
146300
|
1
|
c.1366 G > A (p.G456R)
|
exon 12
|
missense
|
|
|
|
|
|
1
|
c.1581C > G (p.P446G)
|
exon 12
|
missense
|
yes
|
|
|
|
|
1
|
c.583 G > A (p.R136H)
|
exon 5
|
missense
|
|
| CLCN5
|
Dent’s disease
|
300554
|
1
|
p.L594fsX595
|
exon 10
|
nonsense
|
yes
|
|
|
|
|
1
|
p.R637X
|
exon 10
|
nonsense
|
|
|
|
|
|
1
|
p.R467X
|
exon 9
|
nonsense
|
|
|
|
|
|
1
|
p.IVS4-2A > G
|
exon 4
|
splicing
|
yes
|
|
|
|
|
1
|
c.1022C > T (p.S244L)
|
exon 7
|
missense
|
|
|
|
|
|
1
|
c.1805 T > G (p.V505G)
|
exon 9
|
missense
|
yes
|
| CLCN7
|
Osteopetrosis, late-onset form type 2 (OPTA2)
|
166600
|
1
|
c.C856T (p.R286W)
|
exon 10
|
missense
|
|
| COL1A2
|
Osteogenesis imperfecta
|
|
1
|
c.A3350G (p.Y1117C)
|
exon 49
|
missense
|
|
|
|
|
|
1
|
c.G3305C (p.G1102A)
|
exon 49
|
missense
|
|
| COL1A1
|
Osteogenesis imperfecta
|
166220
|
1
|
c.1678 G > A (p.G560S)
|
exon 25
|
missense
|
|
|
|
|
166200
|
1
|
p.Gly632x
|
exon 28
|
nonsense
|
yes
|
|
|
|
166200
|
1
|
p.D1441H
|
exon 52
|
missense
|
yes
|
|
|
|
166200
|
1
|
c.1875 + 1 G > A (IVS 27 + 1 G > A)
|
intron 27
|
splicing
|
yes
|
|
|
|
166200
|
1
|
IVS8-2A > G
|
intron 8
|
splicing
|
yes
|
|
|
|
|
1
|
c.2461 G > A (p.G821S)
|
exon 36
|
missense
|
|
|
|
|
|
1
|
c.3470 G > A (p.G1157D)
|
|
missense
|
yes
|
| COL2A1
|
Spondyloepiphyseal dysplasia congenita (SEDC)
|
183900
|
1
|
c.1510 G > A (p.G504S)
|
|
missense
|
|
|
|
|
|
1
|
c.2401 G > A (p.G801S)
|
|
missense
|
|
| EFNB1
|
Craniofrontonasal Syndrome
|
304110
|
1
|
c.161C > G (p.P54R)
|
exon 2
|
missense
|
yes
|
| COMP
|
Pseudoachondroplasia
|
177170
|
1
|
c.815 T > C (p.L272P)
|
exon 8
|
missense
|
|
| EIF2AK3
|
SED, Wolcott–Rallison type
|
226980
|
1
|
c.1408-1409insT and c.1596 T > A (p.S470FfsX7 and p.C532X)
|
exon 8 and 9
|
nonsense
|
|
| EXT1
|
Multiple cartilaginous exostoses 1
|
133700
|
1
|
c.1564-7delC
|
exon 7
|
frameshift
|
yes
|
|
|
|
|
1
|
I8 + 2 T > G
|
intron 8
|
splicing
|
yes
|
|
|
|
|
1
|
c.651_664delinsTTT (p.K218fsX220)
|
exon 1
|
nonsense
|
|
|
|
|
|
1
|
c.680delG (p.R227fs)
|
exon 1
|
frameshift
|
|
|
|
|
|
1
|
c.1182delG (p.Arg394SerfsX9)
|
exon 4
|
nonsense
|
yes
|
|
|
|
|
1
|
c.1108 G > T (p.E370X)
|
exon 3
|
nonsense
|
yes
|
|
|
|
|
1
|
c.335delA (p.Asn112ThrfsX24)
|
exon 1
|
nonsense
|
yes
|
|
|
|
|
1
|
c.361C > T (p.Q121X)
|
exon 1
|
nonsense
|
yes
|
|
|
|
|
1
|
c.1879_1881delCAC (p.His627del)
|
exon 9
|
In frame deletion
|
yes
|
|
|
|
|
1
|
c.651_664delinsTTT (p.K218fsX220)
|
exon 1
|
frameshift
|
|
|
|
|
|
1
|
1633-26(C > A)
|
intron 7
|
splicing
|
|
|
|
|
|
1
|
c.2120delT
|
exon 6
|
frameshift
|
|
|
|
|
|
1
|
c.811 T > C (p.Y271H)
|
exon 1
|
missense
|
yes
|
| EXT2
|
Multiple cartilaginous exostoses 2
|
133701
|
1
|
c.668 G > C (p.Arg223Pro)
|
exon 2
|
missense
|
|
|
|
|
|
1
|
c.950delT (p.Phe317SerfsX15)
|
exon 6
|
nonsense
|
yes
|
|
|
|
|
3
|
c.1016 G > A (p.Cys339Tyr)
|
exon 6
|
missense
|
|
|
|
|
|
1
|
c.398 T > G (p.L133R)
|
exon 2
|
missense
|
|
|
|
|
|
1
|
c.751C > T (p.Q251X)
|
exon 5
|
missense
|
|
|
|
|
|
1
|
c.544C > T (p.R182X)
|
exon 3
|
missense
|
|
|
|
|
|
1
|
c.536 G > A (p.Arg179Lys)
|
exon 2
|
missense
|
|
|
|
|
|
1
|
c.1006C > T (p.G1n336X)
|
exon 6
|
nonsense
|
yes
|
|
|
|
|
1
|
IVS2 + 1 G > A
|
intron 2
|
splicing
|
|
|
|
|
|
1
|
IVS7 + 1 G > T
|
intron 7
|
splicing
|
|
|
|
|
|
1
|
c.789-796delTGTT
|
exon 5
|
frameshift
|
yes
|
|
|
|
|
1
|
c.637 G > A
|
exon 4
|
nonsense
|
|
|
|
|
|
1
|
c.313A > T (p.Lys105X)
|
exon 2
|
nonsense
|
|
|
|
|
|
1
|
319insGT
|
exon 2
|
frameshift
|
|
|
|
|
|
1
|
536 + 1 G > A (IVS2 + 1 G > A)
|
intron 2
|
splicing
|
|
| FBN1
|
Marfan syndrome
|
154700
|
1
|
c.3463 G > A (p.Asp1155Asn)
|
exon 27
|
missense
|
yes
|
|
|
|
|
1
|
c.5015 G > C (p.C1672S)
|
exon 40
|
missense
|
|
|
|
|
|
3
|
c.5309 G > A (p.C1770Y)
|
exon 43
|
missense
|
|
|
|
|
|
2
|
c.7241 G > A (p.R2414Q)
|
exon 58
|
missense
|
|
|
|
|
|
2
|
c.7769 G > A (p.C2590Y)
|
exon 62
|
missense
|
|
|
|
|
|
2
|
c.2261A > G (p.Y754C)
|
exon 18
|
missense
|
|
|
|
|
|
1
|
c.[6862_6871delGGCTGTGTAG;6871 + 1_6871 + 11delGTAAGAGGATC] (p.Gly2288MetfsX109)
|
exon 55
|
nonsense
|
yes
|
|
|
|
|
1
|
c.2462 G > A (p.Cys821Tyr)
|
exon 20
|
missense
|
yes
|
|
|
|
|
1
|
c.5015 G > C (p.C1672S)
|
exon 40
|
missense
|
|
|
|
|
|
1
|
c.3295 G > T (p.E1099X)
|
exon 26
|
nonsense
|
|
|
|
|
|
2
|
c.4307insTCGT (p.G1441X)
|
exon 34
|
nonsense
|
yes
|
|
|
|
|
1
|
c.4621C > T (p.R1541X)
|
exon 37
|
nonsense
|
|
|
|
|
|
1
|
c.8080C > T (p.A2694X)
|
exon 64
|
nonsense
|
|
|
|
|
|
2
|
IVS29 + 4A > T
|
intron 29
|
splicing
|
|
|
|
|
|
1
|
IVS50 + 1 G > A
|
intron 50
|
splicing
|
|
|
|
|
|
1
|
c.3069 G > T (p.Lys1023Asn)
|
exon 24
|
missense
|
yes
|
|
|
|
|
1
|
c.3243-3256delGCCTCTGCACCCA
|
exon 25
|
frameshift
|
|
| FGFR1
|
Pfeiffer syndrome
|
101600
|
1
|
c.755C > G (p.Pro252Arg)
|
exon 5
|
missense
|
|
| FGFR2
|
Pfeiffer syndrome
|
101600
|
1
|
IVS8 A > G
|
exon 8
|
splicing
|
|
|
|
|
|
1
|
p.Asp321Ala
|
exon 9
|
missense
|
|
|
|
Apert syndrome
|
101200
|
1
|
c.934C > G (p.S252W)
|
exon 7
|
missense
|
|
|
|
Crouzon syndrome
|
123500
|
1
|
c.833 G > T (p.C278F)
|
exon 8
|
missense
|
|
|
|
|
|
1
|
p.Tyr340His
|
exon 9
|
missense
|
|
|
|
|
|
1
|
p.Cys342Trp
|
exon 9
|
missense
|
yes
|
|
|
|
|
1
|
p.Cys342Tyr
|
exon 9
|
missense
|
|
|
|
|
|
1
|
p.Ala344Ala
|
exon 9
|
missense
|
|
|
|
|
|
1
|
p.Gly338Arg
|
exon 9
|
missense
|
|
|
|
|
|
1
|
p.Ala344Gly
|
exon 9
|
missense
|
|
|
|
|
|
1
|
p.Gln289Pro
|
exon 7
|
missense
|
|
| FGFR3
|
Achondroplasia
|
100800
|
21
|
c.1138 G > A (p.G380R)
|
exon 10
|
missense
|
|
|
|
|
|
1
|
p.Ser217Cys
|
exon 5
|
missense
|
|
| FGFR3
|
Thanatophoric dysplasia
|
187600
|
1
|
c.742C > T (p.R248C)
|
exon 7
|
missense
|
|
| GALNS
|
Mucopolysaccharidosis type 4A
|
253000
|
1
|
c.1567 T > G and c.374C > T
|
exon 14 and 4
|
nonsense and missense
|
yes
|
| GDF5
|
Multiple synostoses syndrome type 2
|
186500
|
2
|
c.1471 G > A (p.E491K)
|
exon 2
|
missense
|
|
| GNAS1
|
Albright hereditary osteodystrophy
|
103580
|
1
|
1-bp (C) deletion at codon 291
|
exon 11
|
frameshift
|
|
| HLXB9
|
Currarino triad
|
176450
|
2
|
c.552C > G (p.Tyr184X)
|
|
nonsense
|
|
| TP63
|
Split hand-foot malformation, isolated form, type 4 (SHFM4)
|
605289
|
1
|
c.956 G > A (p.R280H)
|
exon 7
|
missense
|
|
| HOXD13
|
Synpolydactyly
|
186000
|
1
|
c.32 G > C (p.G11A)
|
exon 1
|
missense
|
|
|
|
|
|
1
|
c.64 G > T (p.A22S)
|
exon 1
|
missense
|
yes
|
|
|
|
|
3
|
9-residue polyalanine expansion
|
exon 1
|
|
|
|
|
yes
|
|
|
|
|
|
|
|
|
|
|
1
|
8-residue polyalanine expansion
|
exon 1
|
|
|
|
|
|
|
1
|
7-residue polyalanine expansion
|
exon 1
|
|
|
| IDS
|
Mucopolysaccharidosis type 2
|
309900
|
1
|
c.892C > T (p.Q298X)
|
exon 7
|
nonsense
|
|
|
|
|
|
1
|
c.1468delA
|
exon 9
|
frameshift
|
|
|
|
|
|
1
|
c.263 G > A (p.Arg88His)
|
exon 3
|
missense
|
|
|
|
|
|
1
|
1103_1123del19
|
exon 8
|
frameshift
|
|
| IHH
|
Brachydactyly type A1
|
112500
|
1
|
c.G298A (p.D100N)
|
exon 1
|
missense
|
|
| NF1
|
Neurofibromatosis type 1
|
162200
|
1
|
c.1009 G > T
|
exon 7
|
nonsense
|
yes
|
|
|
|
|
1
|
c.3443-3444delCA
|
exon 20
|
frameshift
|
yes
|
|
|
|
|
1
|
c.4339C > T (p.G1336X)
|
|
nonsense
|
|
|
|
|
|
1
|
c.5839C > T (p.R1947X)
|
exon 31
|
nonsense
|
|
|
|
|
|
1
|
p.Leu1141Arg
|
exon 20
|
missense
|
|
| TP63
|
Ankyloblepharon-ectodermal dysplasia-cleft lip/palate
|
106260
|
1
|
c.838C > T (p.R280C)
|
exon 7
|
missense
|
|
|
|
Limb-mammary syndrome (including ADULT syndrome)
|
603273
|
1
|
c.893 G > A (p.R298Q)
|
exon 8
|
missense
|
|
| PHEX
|
Hypophosphatemic rickets, X-linked dominant
|
307800
|
1
|
IVS20-1 G > T
|
intron 20
|
splicing
|
|
|
|
|
|
1
|
c.1861C > T (p.GIn621X)
|
exon 18
|
missense
|
yes
|
| PTPN11
|
Baller–Gerold syndrome
|
218600
|
1
|
IVS11-1 G > A and c.3401A > T
|
intro 11 and exon 10
|
splicing and nonsense
|
|
| ROR2
|
Brachydactyly type B
|
113000
|
1
|
c.2265C > A (p.Y755X)
|
exon 9
|
nonsense
|
|
|
|
|
|
1
|
c.1398-1399insA
|
exon 9
|
nonsense
|
|
| RUNX2
|
Cleidocranial dysplasia
|
119600
|
1
|
c.346 T > A (p.W116R)
|
exon 1
|
missense
|
|
|
|
|
|
1
|
c.610A > T (p.K204X)
|
exon 3
|
nonsense
|
|
|
|
|
|
1
|
c.346 T > A (p.W116R)
|
exon 1
|
missense
|
|
|
|
|
|
1
|
c.475 G > C (p.G159R)
|
exon 2
|
missense
|
yes
|
|
|
|
|
1
|
c.673C > T (p.R225W)
|
exon 3
|
missense
|
|
|
|
|
|
1
|
c.1171C > G (p.R391X)
|
exon 7
|
nonsense
|
|
|
|
|
|
1
|
c.674 G > A (p.R225Q)
|
exon 3
|
missense
|
|
| SALL1
|
Townes–Brocks syndrome (Renal-Ear-Anal-Radial syndrome)
|
107480
|
4
|
c.1792 G > C
|
exon 2
|
missense
|
|
| SEDL
|
SED tarda, X-linked (SED-XL)
|
313400
|
1
|
c.218C > T (p.S73L)
|
exon 4
|
missense
|
|
|
|
|
|
1
|
c.370-371insA (p.S124fsX127)
|
exon 6
|
nonsense
|
yes
|
|
|
|
|
1
|
c.218C > T (p.S73L)
|
exon 4
|
missense
|
|
|
|
|
|
1
|
c.239A > G (p.H80R)
|
exon 4
|
missense
|
|
|
|
|
|
1
|
c.G209A
|
exon 4
|
nonsense
|
|
|
|
|
|
1
|
c.262-266delGACAT
|
exon 5
|
frameshift
|
|
|
|
|
|
1
|
D109-S123del (p.S124fsX126)
|
intron 5-exon 6
|
nonsense
|
|
|
|
|
|
1
|
IVS5-2-1delAG322-332delTTTTCAATGAA
|
intron 5-exon 6
|
splicing
|
yes
|
|
|
|
|
1
|
IVS2-2A > C
|
intron 2
|
|
|
| SH3BP2
|
Cherubism
|
118400
|
5
|
c.1505 G > C (p.Arg415Pro)
|
exon 9
|
missense
|
|
|
|
|
|
2
|
c.G1520A (p.Gly420Glu)
|
exon 9
|
missense
|
|
| SHOX
|
Dyschondrosteosis
|
127300
|
1
|
c.115 T > G
|
exon 2
|
|
|
|
|
|
|
1
|
c.1171-1172insA
|
exon 3
|
frameshift
|
|
|
|
|
|
1
|
c.996A > T (p.E102V)
|
exon 3
|
missense
|
|
| SOX9
|
Campomelic dysplasia (CD)
|
114290
|
1
|
p.R178L
|
exon 2
|
missense
|
yes
|
| TBX5
|
Holt-Oram syndrome
|
142900
|
1
|
c.416delC
|
exon 4
|
frameshift
|
|
|
|
|
|
1
|
c.145C > A
|
exon 2
|
missense
|
|
|
|
|
|
1
|
c.161 T > C
|
exon 2
|
missense
|
|
| TGFbeta1
|
Diaphyseal dysplasia Camurati-Engelmann
|
131300
|
1
|
p.R218H
|
exon 4
|
missense
|
|
| WISP3
|
Progressive pseudorheumatoid dysplasia
|
208230
|
1
|
c.624-625insA and c.729-735delGAGAAAA
|
exon 4 and exon 4
|
frameshift and frameshift
|
yes
|
|
|
|
|
1
|
c.624-625insA and c.866-867insA
|
exon 4 and exon 5
|
frameshift and frameshift
|
yes
|
|
|
|
|
1
|
c.866_867insA and c.866-867insA
|
exon 5 and exon 5
|
frameshift and frameshift
|
yes
|
| 1 | c.589 + 2 T > C and c.624dupA | intro 3 and exon 4 | splicing and nonsense | yes |
*: “Pedigree mutation”, that is an identical mutation has been reported in more than one affected siblings in a family, was counted as one case. Mutation information was extracted from the full text, as its original description, all the novel mutations were claimed in the papers by the authors, and then were confirmed by searching the previous literature and the Human Gene Mutation Database.
Article Categories:
Keywords: Rare diseases, Genetic skeletal diseases, China, Bibliographic study. |
|
Previous Document: Phylogenetic host specificity and understanding parasite sharing in primates.
Next Document: Giving oocytes to women in need: permitted, forbidden, or pressured? A commentary.




