Document Detail


In vitro replication studies of carboxymethylated DNA lesions with Saccharomyces cerevisiae polymerase η.
MedLine Citation:
PMID:  21809836     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
Humans are exposed to N-nitroso compounds (NOCs) both endogenously and exogenously from a number of environmental sources, and NOCs are both mutagenic and carcinogenic. After metabolic activation, some NOCs can induce carboxymethylation of nucleobases through a diazoacetate intermediate, which could give rise to p53 mutations similar to those seen in human gastrointestinal cancers. It was previously found that the growth of polymerase η-deficient human cells was inhibited by treatment with azaserine, a DNA carboxymethylation agent, suggesting the importance of this polymerase in bypassing the azaserine-induced carboxymethylated DNA lesions. In this study, we examined how carboxymethylated DNA lesions, which included N(6)-carboxymethyl-2'-deoxyadenosine (N(6)-CMdA), N(4)-carboxymethyl-2'-deoxycytidine (N(4)-CMdC), N3-carboxymethylthymidine (N3-CMdT), and O(4)-carboxymethylthymidine (O(4)-CMdT), perturbed the efficiency and fidelity of DNA replication mediated by Saccharomyces cerevisiae polymerase η (pol η). Our results from steady-state kinetic assay showed that pol η could readily bypass and extend past N(6)-CMdA and incorporated the correct nucleotides opposite the lesion and its neighboring 5'-nucleoside with high efficiency. By contrast, the polymerase could bypass N(4)-CMdC inefficiently, with substantial misincorporation of dCMP followed by dAMP, though pol η could extend past the lesion with high fidelity and efficiency when dGMP was incorporated opposite the lesion. On the other hand, yeast pol η experienced great difficulty in bypassing O(4)-CMdT and N3-CMdT, and the polymerase inserted preferentially the incorrect dGMP opposite these two DNA lesions; the extension step, nevertheless, occurred with high fidelity and efficiency when the correct dAMP was opposite the lesion, as opposed to the preferentially incorporated incorrect dGMP. These results suggest that these lesions may contribute significantly to diazoacetate-induced mutations and those in the p53 gene observed in human gastrointestinal tumors.
Authors:
Ashley L Swanson; Jianshuang Wang; Yinsheng Wang
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Publication Detail:
Type:  Comparative Study; Journal Article; Research Support, N.I.H., Extramural     Date:  2011-08-11
Journal Detail:
Title:  Biochemistry     Volume:  50     ISSN:  1520-4995     ISO Abbreviation:  Biochemistry     Publication Date:  2011 Sep 
Date Detail:
Created Date:  2011-08-30     Completed Date:  2011-10-21     Revised Date:  2014-09-24    
Medline Journal Info:
Nlm Unique ID:  0370623     Medline TA:  Biochemistry     Country:  United States    
Other Details:
Languages:  eng     Pagination:  7666-73     Citation Subset:  IM    
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MeSH Terms
Descriptor/Qualifier:
DNA Methylation / physiology*
DNA Replication / physiology*
DNA, Bacterial / genetics,  metabolism*
DNA-Directed DNA Polymerase / genetics,  metabolism*
Nitrosamines / metabolism
Oligodeoxyribonucleotides / genetics,  metabolism
Saccharomyces cerevisiae / enzymology*,  genetics
Saccharomyces cerevisiae Proteins / genetics,  metabolism*
Grant Support
ID/Acronym/Agency:
R01 DK082779/DK/NIDDK NIH HHS; R01 DK082779/DK/NIDDK NIH HHS; R01 DK082779-02/DK/NIDDK NIH HHS; R01 DK082779-03/DK/NIDDK NIH HHS; T32 ES018827/ES/NIEHS NIH HHS; T32 ES018827/ES/NIEHS NIH HHS; T32 ES018827-02/ES/NIEHS NIH HHS
Chemical
Reg. No./Substance:
0/DNA, Bacterial; 0/Nitrosamines; 0/Oligodeoxyribonucleotides; 0/Saccharomyces cerevisiae Proteins; EC 2.7.7.7/DNA-Directed DNA Polymerase
Comments/Corrections

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


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