Document Detail


The exact distribution of divergence times.
MedLine Citation:
PMID:  17914656     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
The recent work of Haubold and Wiehe (Mol. Biol. Evol. 18:1157-1160, 2001) considered statistical inference of the divergence time. However, there appears to be a fundamental flaw in the paper since it treated the divergence time as a random variable and not as a parameter. In this note, we derive a valid statistical inference for the divergence time. We derive an estimator for the divergence time as well as explicit expressions for its the probability density function, cumulative distribution function and the means. We also provide a 5-line computer program for computing the associated confidence intervals. We expect that the results presented could be useful for statistical modeling of divergence times.
Authors:
Saralees Nadarajah; Samuel Kotz
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Publication Detail:
Type:  Journal Article     Date:  2007-10-04
Journal Detail:
Title:  Bulletin of mathematical biology     Volume:  70     ISSN:  0092-8240     ISO Abbreviation:  Bull. Math. Biol.     Publication Date:  2008 Feb 
Date Detail:
Created Date:  2008-01-21     Completed Date:  2008-04-11     Revised Date:  2008-11-21    
Medline Journal Info:
Nlm Unique ID:  0401404     Medline TA:  Bull Math Biol     Country:  United States    
Other Details:
Languages:  eng     Pagination:  635-40     Citation Subset:  IM    
Affiliation:
School of Mathematics, University of Manchester, Manchester M60 1QD, UK saralees.nadarajah@manchester.ac.uk
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MeSH Terms
Descriptor/Qualifier:
Amino Acid Substitution / genetics
Chronobiology Phenomena / genetics*
Confidence Intervals
Evolution, Molecular
Genetic Speciation*
Likelihood Functions
Models, Statistical
Phylogeny
Polymorphism, Genetic
Statistical Distributions*

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


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