Document Detail


The crystal structure of murine p97/VCP at 3.6A.
MedLine Citation:
PMID:  14643202     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
p97/VCP is a member of the AAA ATPase family and has roles in both membrane fusion and ubiquitin dependent protein degradation. Here, we present a 3.6A crystal structure of murine p97 in which D2 domain has been modelled as poly-alanine and the remaining approximately 100 residues are absent. The resulting structure illustrates a head-to-tail packing arrangement of the two p97 AAA domains in a natural hexameric state with D1 ADP bound and D2 nucleotide free. The head-to-tail packing arrangement observed in this structure is in contrast to our previously predicted tail-to-tail packing model. The linker between the D1 and D2 domains is partially disordered, suggesting a flexible nature. Normal mode analysis of the crystal structure suggests anti-correlated motions and distinct conformational states of the two AAA domains.
Authors:
Trevor Huyton; Valerie E Pye; Louise C Briggs; Terence C Flynn; Fabienne Beuron; Hisao Kondo; Jianpeng Ma; Xiaodong Zhang; Paul S Freemont
Publication Detail:
Type:  Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, U.S. Gov't, P.H.S.    
Journal Detail:
Title:  Journal of structural biology     Volume:  144     ISSN:  1047-8477     ISO Abbreviation:  J. Struct. Biol.     Publication Date:  2003 Dec 
Date Detail:
Created Date:  2003-12-03     Completed Date:  2004-07-19     Revised Date:  2009-09-03    
Medline Journal Info:
Nlm Unique ID:  9011206     Medline TA:  J Struct Biol     Country:  United States    
Other Details:
Languages:  eng     Pagination:  337-48     Citation Subset:  IM    
Affiliation:
Department of Biological Sciences, Imperial College London, South Kensington SW7 2AZ, UK.
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MeSH Terms
Descriptor/Qualifier:
Adenosine Triphosphatases / chemistry
Animals
Anisotropy
Cell Cycle Proteins / chemistry*
Cloning, Molecular
Crystallography, X-Ray
Electrons
Endopeptidase Clp
Mice
Models, Molecular
Models, Statistical
Protein Conformation
Protein Structure, Tertiary
Recombinant Proteins / chemistry
Serine Endopeptidases / chemistry
Grant Support
ID/Acronym/Agency:
R01-GM067801/GM/NIGMS NIH HHS
Chemical
Reg. No./Substance:
0/Cell Cycle Proteins; 0/Recombinant Proteins; EC 3.4.21.-/Serine Endopeptidases; EC 3.4.21.92/Endopeptidase Clp; EC 3.6.1.-/Adenosine Triphosphatases; EC 3.6.1.-/CDC48 protein

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


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