Document Detail

An algorithm to find all palindromic sequences in proteins.
MedLine Citation:
PMID:  23385825     Owner:  NLM     Status:  In-Data-Review    
A palindrome is a set of characters that reads the same forwards and backwards. Since the discovery of palindromic peptide sequences two decades ago, little effort has been made to understand its structural, functional and evolutionary significance. Therefore, in view of this, an algorithm has been developed to identify all perfect palindromes (excluding the palindromic subset and tandem repeats) in a single protein sequence. The proposed algorithm does not impose any restriction on the number of residues to be given in the input sequence. This avant-garde algorithm will aid in the identification of palindromic peptide sequences of varying lengths in a single protein sequence.
N Prasanth; M Kirti Vaishnavi; K Sekar
Related Documents :
17946085 - E. coli promoter prediction using feed-forward neural networks.
23872175 - 'big data', hadoop and cloud computing in genomics.
24108185 - Robust adjustment of sequence tag abundance.
24130835 - Characterization of liaoning cashmere goat transcriptome: sequencing, de novo assembly,...
23961915 - Identification of piggybac-mediated insertions in plasmodium berghei by next generation...
17246395 - Restriction site variation in the zea chloroplast genome.
Publication Detail:
Type:  Journal Article    
Journal Detail:
Title:  Journal of biosciences     Volume:  38     ISSN:  0973-7138     ISO Abbreviation:  J. Biosci.     Publication Date:  2013 Mar 
Date Detail:
Created Date:  2013-02-06     Completed Date:  -     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  8100809     Medline TA:  J Biosci     Country:  India    
Other Details:
Languages:  eng     Pagination:  173-7     Citation Subset:  IM    
Supercomputer Education and Research Centre, Indian Institute of Science, Bangalore 560 012.
Export Citation:
APA/MLA Format     Download EndNote     Download BibTex
MeSH Terms

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine

Previous Document:  Excised radicle tips as a source of genomic DNA for PCR-based genotyping and melting curve analysis ...
Next Document:  Metabolic phenotyping for the classification of coffee trees and the exploration of selection marker...