Document Detail

Submitting proteomics data to PRIDE using PRIDE Converter.
MedLine Citation:
PMID:  21082439     Owner:  NLM     Status:  In-Process    
With the continuously growing amount of proteomics data being produced, it has become increasingly important to make these data publicly available so that they can be audited, reanalyzed, and reused. More and more journals are also starting to request the deposition of MS data in publicly available repositories for submitted proteomics manuscripts. In this chapter we focus on one of the most commonly used proteomics data repositories, PRIDE (the PRoteomics IDEntifications database,, and demonstrate how a new graphical user interface tool called PRIDE Converter ( greatly simplifies the submission of data to PRIDE.
Harald Barsnes; Juan Antonio Vizcaíno; Florian Reisinger; Ingvar Eidhammer; Lennart Martens
Related Documents :
19968439 - Exploring mass perception with markov chain monte carlo.
10596769 - Models of the apparent mass of the seated human body exposed to horizontal whole-body v...
20627589 - When proteomics meets structural biology.
18964679 - Optimization of automatically generated rules for predicting the presence and absence o...
16705649 - A statistical framework to discover true associations from multiprotein complex pull-do...
17094249 - Normalization regarding non-random missing values in high-throughput mass spectrometry ...
3759999 - A new parallelism acceptance criterion for validating large plate bioassay results.
17134709 - Comparison of migration models for acidic solutes in micellar electrokinetic chromatogr...
22352759 - Cystic fibrosis transmembrane conductance regulator: a molecular model defines the arch...
Publication Detail:
Type:  Journal Article    
Journal Detail:
Title:  Methods in molecular biology (Clifton, N.J.)     Volume:  694     ISSN:  1940-6029     ISO Abbreviation:  Methods Mol. Biol.     Publication Date:  2011  
Date Detail:
Created Date:  2010-11-18     Completed Date:  -     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  9214969     Medline TA:  Methods Mol Biol     Country:  United States    
Other Details:
Languages:  eng     Pagination:  237-53     Citation Subset:  IM    
Department of Informatics, University of Bergen, Bergen, Norway.
Export Citation:
APA/MLA Format     Download EndNote     Download BibTex
MeSH Terms

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine

Previous Document:  Preparing molecular interaction data for publication.
Next Document:  Automated data integration and determination of posttranslational modifications with the protein inf...