Document Detail


Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil.
MedLine Citation:
PMID:  18450695     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
A polyphasic study was undertaken to establish the taxonomic status of a wheat-field soil isolate. The organism, strain 88T, was found to have a range of chemical and morphological properties consistent with its classification in the genus Saccharopolyspora. Phylogenetic analysis based on an almost-complete 16S rRNA gene sequence of the strain showed that it formed a monophyletic clade with the type strain of Saccharopolyspora spinosa. However, the two strains shared low DNA-DNA relatedness. Strain 88T also had a profile of phenotypic properties that readily distinguished it from representatives of the species of Saccharopolyspora with validly published names. It is evident from the combination of genotypic and phenotypic data that the organism should be classified within a novel species of the genus Saccharopolyspora, for which the name Saccharopolyspora shandongensis sp. nov. is proposed. The type strain is strain 88T (=CGMCC 4.3530T =JCM 14614T).
Authors:
Jianli Zhang; Dongdong Wu; Jun Zhang; Zhiheng Liu; Fei Song
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Publication Detail:
Type:  Journal Article; Research Support, Non-U.S. Gov't    
Journal Detail:
Title:  International journal of systematic and evolutionary microbiology     Volume:  58     ISSN:  1466-5026     ISO Abbreviation:  Int. J. Syst. Evol. Microbiol.     Publication Date:  2008 May 
Date Detail:
Created Date:  2008-05-02     Completed Date:  2008-07-15     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  100899600     Medline TA:  Int J Syst Evol Microbiol     Country:  England    
Other Details:
Languages:  eng     Pagination:  1094-9     Citation Subset:  IM    
Affiliation:
School of Life Science and Technology, Beijing Institute of Technology, Beijing 100081, PR China. zhangjianli@bit.edu.cn
Data Bank Information
Bank Name/Acc. No.:
GENBANK/EF104116
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MeSH Terms
Descriptor/Qualifier:
Bacterial Typing Techniques
DNA, Bacterial / analysis,  isolation & purification
Genes, rRNA
Genotype
Molecular Sequence Data
Nucleic Acid Hybridization
Phenotype
Phylogeny
RNA, Ribosomal, 16S / genetics
Saccharopolyspora / classification*,  genetics,  isolation & purification,  physiology
Sequence Analysis, DNA
Soil Microbiology*
Species Specificity
Triticum*
Chemical
Reg. No./Substance:
0/DNA, Bacterial; 0/RNA, Ribosomal, 16S

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


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