| RRTree: relative-rate tests between groups of sequences on a phylogenetic tree. | |
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MedLine Citation:
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PMID: 10869026 Owner: NLM Status: MEDLINE |
Abstract/OtherAbstract:
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RRTree is a user-friendly program for comparing substitution rates between lineages of protein or DNA sequences, relative to an outgroup, through relative rate tests. Genetic diversity is taken into account through use of several sequences, and phylogenetic relations are integrated by topological weighting. AVAILABILITY: The ANSI C source code of RRTree, and compiled versions for Macintosh, MS-DOS/Windows, SUN Solaris, and CGI, are freely available at http://pbil.univ-lyon1.fr/software/rrtree.html CONTACT: marc.robinson@ens-lyon.fr |
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Authors:
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M Robinson-Rechavi; D Huchon |
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Publication Detail:
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Type: Journal Article; Research Support, Non-U.S. Gov't |
Journal Detail:
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Title: Bioinformatics (Oxford, England) Volume: 16 ISSN: 1367-4803 ISO Abbreviation: Bioinformatics Publication Date: 2000 Mar |
Date Detail:
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Created Date: 2000-08-17 Completed Date: 2000-08-17 Revised Date: 2010-05-10 |
Medline Journal Info:
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Nlm Unique ID: 9808944 Medline TA: Bioinformatics Country: ENGLAND |
Other Details:
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Languages: eng Pagination: 296-7 Citation Subset: IM |
Affiliation:
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Department of Zoology, Tel Aviv University, Ramat Aviv 69978, Israel Institut des Sciences de l'Evolution, Universit?Montpellier 2, 34095 Montpellier, France. mark.robinson@ens-lyon.fr |
Export Citation:
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| MeSH Terms | |
Descriptor/Qualifier:
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Algorithms DNA / chemistry* Phylogeny* Proteins / chemistry* Sequence Analysis / methods Software* |
| Chemical | |
Reg. No./Substance:
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0/Proteins; 9007-49-2/DNA |
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine
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