Document Detail


RNA pathogen detection with one-step reverse transcription PCR and strand-displacement based signal amplification.
MedLine Citation:
PMID:  23348105     Owner:  NLM     Status:  Publisher    
Abstract/OtherAbstract:
A novel detection method for RNA pathogens based on one-step reverse transcription PCR is introduced here. This method utilized the reverse transcriptase activity and the 5'-nuclease activity of TaqM1 DNA polymerase to transform target RNA into cDNA. The following PCR process released a fragment from the 5' end as a specific probe. Afterwards this fragment triggered a strand-displacement based signal amplification to release large amounts of G-quadruplex DNAzymes. All the probes applied in our method were unmodified DNA oligonucleotides. The detection results could be reported without sophisticated instruments either in the colorimetric way through oxidizing ABTS or in the fluorometric way by using tyramine as substrate. This approach could successfully detect HIV-1 in a blood sample and it has a linear concentration range of 6 fM to 60 pM.
Authors:
Feng Du; Frank Streckenbach; Haodong Chen; Xin Huang; Zhuo Tang; Andreas Marx
Related Documents :
24395365 - Simple cloning and dna assembly in escherichia coli by prolonged overlap extension pcr.
23986395 - Protein-dna force assay in a microfluidic format.
20861355 - Deoxyuridine triphosphate incorporation during somatic hypermutation of mouse vkox gene...
16348505 - Dna synthesis and tritiated thymidine incorporation by heterotrophic freshwater bacteri...
8853035 - Human papillomavirus and epstein-barr virus in sinonasal schneiderian papillomas. an in...
14997525 - Increased single-nucleotide discrimination of pcr by primer probes bearing hydrophobic ...
Publication Detail:
Type:  JOURNAL ARTICLE     Date:  2013-1-25
Journal Detail:
Title:  The Analyst     Volume:  -     ISSN:  1364-5528     ISO Abbreviation:  Analyst     Publication Date:  2013 Jan 
Date Detail:
Created Date:  2013-1-25     Completed Date:  -     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  0372652     Medline TA:  Analyst     Country:  -    
Other Details:
Languages:  ENG     Pagination:  -     Citation Subset:  -    
Affiliation:
Natural Products Research Center, Chengdu Institution of Biology, Chinese Academy of Science, Chengdu 610041, P. R. China. tangzhuo@cib.ac.cn.
Export Citation:
APA/MLA Format     Download EndNote     Download BibTex
MeSH Terms
Descriptor/Qualifier:

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


Previous Document:  Differential chemokine induction by 1-nitropyrene and 1-aminopyrene in bronchial epithelial cells: I...
Next Document:  The action of kisspeptin-13 on passive avoidance learning in mice. Involvement of transmitters.