Document Detail


Quantitative profiling of serum samples using TMT protein labelling, fractionation and LC-MS/MS.
MedLine Citation:
PMID:  21397697     Owner:  NLM     Status:  Publisher    
Abstract/OtherAbstract:
Blood-borne biomarkers are urgently required for the early detection, accurate diagnosis and prognosis of disease. Additionally, improved methods of profiling serum and plasma proteins for biomarker discovery efforts are needed. Herein, we report a quantitative method based on amino-group labelling of serum proteins (rather than peptides) with isobaric tandem mass tags (TMT) and incorporating immune-based depletion, gel-based and strong anion exchange separation of proteins prior to differential endoproteinase treatment and liquid chromatography tandem mass spectrometry. We report a generally higher level of quantitative coverage of the serum proteome compared to other peptide-based isobaric tagging approaches and show the potential of the method by applying it to a set of unique samples that pre-date the diagnosis of pancreatic cancer.
Authors:
John Sinclair; John F Timms
Related Documents :
19625127 - Bioseparation and activity of khaya senegalensis fractions against infective larvae of ...
3507227 - Hydrophobic interaction chromatography of autoproteolysis products of human seminal pla...
6314647 - Induction of neutralizing antibodies by all three structural poliovirus polypeptides.
12745247 - Photoactive extracts from thevetia peruviana with antifungal properties against cladosp...
3432307 - Stability of leukotrienes c4 and d4 in human urine.
18214567 - Combining results of two gc separations partly achieves determination of all cis and tr...
Publication Detail:
Type:  JOURNAL ARTICLE     Date:  2011-3-10
Journal Detail:
Title:  Methods (San Diego, Calif.)     Volume:  -     ISSN:  1095-9130     ISO Abbreviation:  -     Publication Date:  2011 Mar 
Date Detail:
Created Date:  2011-3-14     Completed Date:  -     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  9426302     Medline TA:  Methods     Country:  -    
Other Details:
Languages:  ENG     Pagination:  -     Citation Subset:  -    
Copyright Information:
Copyright © 2011 Elsevier Inc. All rights reserved.
Affiliation:
Cancer Proteomics Laboratory, EGA Institute for Women's Health, University College London UCL.
Export Citation:
APA/MLA Format     Download EndNote     Download BibTex
MeSH Terms
Descriptor/Qualifier:

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


Previous Document:  Role of mitochondrial uncoupling protein 4 in rat inner ear.
Next Document:  Expression and purification of recombinant human apolipoprotein C-I in Pichia pastoris.