Document Detail


PseAAC-Builder: A Cross-platform Stand-alone Program for Generating Various Special Chou's Pseudo-amino Acid Compositions.
MedLine Citation:
PMID:  22459120     Owner:  NLM     Status:  Publisher    
Abstract/OtherAbstract:
The pseudo-amino acid composition (PseAAC) has been widely used to convert complicated protein sequences with various lengths to fixed length digital feature vectors while keeping considerable sequence-order information. However, so far the only software available to the public is the web-server PseAAC (http://www.csbio.sjtu.edu.cn/bioinf/PseAAC/), which has some limitations in dealing with large-scale datasets. Here, we proposed a new cross-platform stand-alone software, called PseAAC-Builder (http://pseb.sf.net) , which can be used to generate various modes of Chou's pseudo-amino acid composition in a much more efficient and flexible way. It is anticipated that PseAAC-Builder may become a useful tool for studying various protein attributes.
Authors:
Pufeng Du; Xin Wang; Chao Xu; Yang Gao
Publication Detail:
Type:  JOURNAL ARTICLE     Date:  2012-3-26
Journal Detail:
Title:  Analytical biochemistry     Volume:  -     ISSN:  1096-0309     ISO Abbreviation:  -     Publication Date:  2012 Mar 
Date Detail:
Created Date:  2012-3-30     Completed Date:  -     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  0370535     Medline TA:  Anal Biochem     Country:  -    
Other Details:
Languages:  ENG     Pagination:  -     Citation Subset:  -    
Copyright Information:
Copyright © 2012. Published by Elsevier Inc.
Affiliation:
School of Computer Science and Technology, Tianjin University, Tianjin 300072, China.
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