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Phycicoccus badiiscoriae sp. nov., a novel actinomycete isolated from scoria.
MedLine Citation:
PMID:  22685104     Owner:  NLM     Status:  Publisher    
Abstract/OtherAbstract:
An actinomycete strain, designated Sco-B23T, was isolated from a brown-coloured layer of scoria collected near Daranshi Oreum (small mountain) in Jeju, Republic of Korea. The cells of the organism were Gram-positive, non-endospore-forming, non-motile cocci and grew at 20-35 °C and pH 5.1-11.1 with 0-1% (w/v) NaCl. Colonies were circular, translucent and moderate yellow in colour with entire margins. On the basis of 16S rRNA gene sequence analysis, the isolate belonged to the genus Phycicoccus and formed a monophyletic line between a P. bigeumensis-P. dokdoensis cluster and a P. aerophilus-P. ginsenosidimutans cluster. The 16S rRNA gene sequence similarities were P. bigeumensis (98.8%), P. dokdoensis (98.7%), P. aerophilus (97.7%), P. ginsenosidimutans (97.7%), P. cremeus (96.9%) and P. jejuensis (96.5%). Chemotaxonomic characters were typical for the genus Phycicoccus. DNA-DNA relatedness between strain Sco-B23T and the close relatives within the genus Phycicoccus was below 17.4%%. On the basis of phenotypic features and DNA-DNA hybridization data, strain Sco-B23T represents a novel species of the genus Phycicoccus, for which the name Phycicoccus badioscoriae sp. nov. is proposed. The type strain is strain Sco-B23T (= KCTC 19807T = KACC 15111T = NBRC 107918T).
Authors:
Soon Dong Lee
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Publication Detail:
Type:  JOURNAL ARTICLE     Date:  2012-6-8
Journal Detail:
Title:  International journal of systematic and evolutionary microbiology     Volume:  -     ISSN:  1466-5034     ISO Abbreviation:  -     Publication Date:  2012 Jun 
Date Detail:
Created Date:  2012-6-11     Completed Date:  -     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  100899600     Medline TA:  Int J Syst Evol Microbiol     Country:  -    
Other Details:
Languages:  ENG     Pagination:  -     Citation Subset:  -    
Affiliation:
Jeju National University.
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