| PGDSpider: An automated data conversion tool for connecting population genetics and genomics programs. | |
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MedLine Citation:
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PMID: 22110245 Owner: NLM Status: Publisher |
Abstract/OtherAbstract:
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SUMMARY: The analysis of genetic data often requires a combination of several approaches using different and sometimes incompatible programs. In order to facilitate data exchange and file conversions between population genetics programs, we introduce PGDSpider, a Java program that can read 27 different file formats and export data into 29, partially overlapping, other file formats. The PGDSpider package includes both an intuitive graphical user interface and a command-line version allowing its integration in complex data analysis pipelines. AVAILABILITY: PGDSpider is freely available under the BSD 3-Clause license on http://cmpg.unibe.ch/software/PGDSpider/ CONTACT: heidi.lischer@iee.unibe.ch SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. |
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Authors:
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H E L Lischer; L Excoffier |
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Publication Detail:
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Type: JOURNAL ARTICLE Date: 2011-11-21 |
Journal Detail:
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Title: Bioinformatics (Oxford, England) Volume: - ISSN: 1367-4811 ISO Abbreviation: - Publication Date: 2011 Nov |
Date Detail:
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Created Date: 2011-11-23 Completed Date: - Revised Date: - |
Medline Journal Info:
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Nlm Unique ID: 9808944 Medline TA: Bioinformatics Country: - |
Other Details:
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Languages: ENG Pagination: - Citation Subset: - |
Affiliation:
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CMPG, Institute of Ecology and Evolution, University of Berne, Baltzerstrasse 6, 3012 Berne, Switzerland. |
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine
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