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Micromonospora humi sp. nov., isolated from peat swamp forest soil.
MedLine Citation:
PMID:  20562246     Owner:  NLM     Status:  In-Data-Review    
Abstract/OtherAbstract:
A novel actinomycete, strain P0402(T), was isolated from peat swamp forest soil collected in Thailand. Its taxonomic position was determined by using a polyphasic taxonomic approach. The chemotaxonomic characteristics of this strain matched those of the genus Micromonospora, i.e. the presence of meso-diaminopimelic acid and N-glycolyl muramic acid in the peptidoglycan, whole-cell sugar pattern D, phospholipid type II, and cellular fatty acid type 3b. Phylogenetic analysis based on 16S rRNA gene sequences revealed a close relationship between strain P0402(T) and Micromonospora coxensis JCM 13248(T) (99.0 % similarity), Micromonospora eburnea JCM 12345(T) (99.0 %), Micromonospora marina JCM 12870(T) (98.9 %), Micromonospora halophytica JCM 3125(T) (98.7 %), Micromonospora chalcea JCM 3031(T) (98.7 %), Micromonospora purpureochromogenes JCM 3156(T) (98.6 %) and Micromonospora aurantiaca JCM 10878(T) (98.5 %). It could be clearly distinguished from these type strains based on low levels of DNA-DNA relatedness and phenotypic differences. On the basis of the data presented, strain P0402(T) is suggested to represent a novel species of the genus Micromonospora, for which the name Micromonospora humi sp. nov. is proposed. The type strain is P0402(T) ( = JCM 15292(T)  = PCU 315(T)  = TISTR 1883(T)).
Authors:
Apakorn Songsumanus; Somboon Tanasupawat; Chitti Thawai; Khanit Suwanborirux; Takuji Kudo
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Publication Detail:
Type:  Journal Article     Date:  2010-06-18
Journal Detail:
Title:  International journal of systematic and evolutionary microbiology     Volume:  61     ISSN:  1466-5034     ISO Abbreviation:  Int. J. Syst. Evol. Microbiol.     Publication Date:  2011 May 
Date Detail:
Created Date:  2011-05-10     Completed Date:  -     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  100899600     Medline TA:  Int J Syst Evol Microbiol     Country:  England    
Other Details:
Languages:  eng     Pagination:  1176-81     Citation Subset:  IM    
Affiliation:
Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand.
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