Document Detail


Low genetic diversity and biased distribution of mitochondrial DNA haplotypes in the Japanese macaque (Macaca fuscata yakui) on Yakushima Island.
MedLine Citation:
PMID:  16418879     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
The Japanese macaques (Macaca fuscata yakui) on Yakushima Island are an endemic subspecies and are closely related to the population of Kyushu, one of the main islands of Japan. Using feces collected throughout Yakushima Island, we examined mitochondrial DNA (mtDNA) to investigate the phylogeography of Japanese macaques. Six haplotypes were observed for a 203-bp fragment of the mtDNA control region. The nucleotide diversity (pi) was low (0.0021). The genetic divergence within the Yakushima population was lower (0.009) than that among four haplotypes of the Kyushu population (0.015), calculated using Kimura's two-parameter method. The mismatch distribution analysis of the six haplotypes of the Yakushima population suggested that the Yakushima population had experienced a sudden expansion in population size, which could be related to the bottleneck effect. The geographic distribution of the mtDNA haplotypes was not uniform. One haplotype was distributed widely, whereas the other five haplotypes were distributed only in the lowlands. The low genetic diversity and biased distribution are discussed in relation to an environmental crash caused by ancient volcanic activity near this island, which is postulated to have happened about 7,300 years ago, and the delayed recovery of highland vegetation.
Authors:
Shuhei Hayaishi; Yoshi Kawamoto
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Publication Detail:
Type:  Journal Article; Research Support, Non-U.S. Gov't     Date:  2006-01-18
Journal Detail:
Title:  Primates; journal of primatology     Volume:  47     ISSN:  0032-8332     ISO Abbreviation:  Primates     Publication Date:  2006 Apr 
Date Detail:
Created Date:  2006-03-28     Completed Date:  2006-05-22     Revised Date:  2008-11-21    
Medline Journal Info:
Nlm Unique ID:  0401152     Medline TA:  Primates     Country:  Japan    
Other Details:
Languages:  eng     Pagination:  158-64     Citation Subset:  IM    
Affiliation:
Laboratory of Human Evolution Studies, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo, Kyoto 606-8502, Japan. hayaishi@jinrui.zool.kyoto-u.ac.jp
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MeSH Terms
Descriptor/Qualifier:
Altitude
Animals
DNA, Mitochondrial / genetics*
Demography
Female
Genetic Variation*
Geography
Haplotypes / genetics*
Japan
Macaca / genetics*
Male
Phylogeny
Chemical
Reg. No./Substance:
0/DNA, Mitochondrial

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


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