Document Detail


IP-COSY, a totally in-phase and sensitive COSY experiment.
MedLine Citation:
PMID:  15706609     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
The IP-COSY experiment presented in this paper gives an in-phase spectral presentation in both the F(1) and F(2) dimensions by a combined use of a constant evolution time (CT) in t(1) and a symmetrical refocusing period before t(2). Compared with DQF-COSY and CT-COSY, IP-COSY further alleviates the effect of signal reduction due to a small ratio p (= J/linewidth), showing (1) improved lineshape and cross-peak definition and (2) especially enhancement in signals of the peaks of small active J coupling constant and the peaks of broader linewidth. A new strategy was adopted to eliminate or reduce effectively artifactual peaks by adding a 0.1-0.2 ms variation to the time delays of the CT period used for each scan of the FID in IP-COSY and CT-COSY. (3)J(H,H) coupling constants of larger than 4 Hz in the fingerprint region of peptides can be directly derived from the separation of doublets. IP-COSY cross peaks are stronger than those in DQF-COSY by 4-20-fold for tested peptides and oligonucleotides (MW < 8 kDa) with acquisition and processing parameters used in the work, and they are easier to identify than those in CT-COSY. The overall improvement in IP-COSY should make the detection/autodetection of the COSY cross peaks and the measurements of the various coupling constants more easily achieved, providing valuable information for the structure elucidation of peptides/small proteins and oligonucleotides.
Authors:
Youlin Xia; Glen Legge; Kyu-Yeon Jun; Yulan Qi; Hunjoong Lee; Xiaolian Gao
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Publication Detail:
Type:  Comparative Study; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S.    
Journal Detail:
Title:  Magnetic resonance in chemistry : MRC     Volume:  43     ISSN:  0749-1581     ISO Abbreviation:  Magn Reson Chem     Publication Date:  2005 May 
Date Detail:
Created Date:  2005-04-12     Completed Date:  2005-08-29     Revised Date:  2007-11-14    
Medline Journal Info:
Nlm Unique ID:  9882600     Medline TA:  Magn Reson Chem     Country:  England    
Other Details:
Languages:  eng     Pagination:  372-9     Citation Subset:  IM    
Copyright Information:
Copyright (c) 2005 John Wiley & Sons, Ltd.
Affiliation:
Department of Chemistry, University of Houston, Houston, Texas 77004-5003, USA.
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MeSH Terms
Descriptor/Qualifier:
Nuclear Magnetic Resonance, Biomolecular / methods*
Nucleic Acid Conformation
Oligonucleotides / chemistry*
Peptides / chemistry*
Protein Conformation
Proteins / chemistry*
Time Factors
Grant Support
ID/Acronym/Agency:
GM49957/GM/NIGMS NIH HHS
Chemical
Reg. No./Substance:
0/Oligonucleotides; 0/Peptides; 0/Proteins

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