Document Detail


Development of breed identification markers based on a bovine 50K SNP array.
MedLine Citation:
PMID:  20374900     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
In Japan, Japanese Black and Holstein cattle are appreciated as popular sources of meat, and imported beef from Australia and the United States is also in demand in the meat industry. Since the BSE outbreak, the problem of false sales has arisen: imported beef has sometimes been mislabeled as domestic beef due to consumer concerns. A method is needed to correctly discriminate between Japanese and imported cattle for food safety. The objective of this study was to develop breed discrimination markers between Japanese and US cattle using a 50K SNP array. As a result, five US-specific markers (BISNP7, BISNP15, BISNP21, BISNP23, and BISNP26) were developed with allelic frequencies that ranged from 0.102 (BISNP15) to 0.250 (BISNP7) and averaged 0.184. The combined use of the five markers would permit discrimination between Japanese and US cattle with a probability of identification of 0.858. This result indicates the potential of the bovine 50K SNP array as a powerful tool for developing breed identification markers. These markers would contribute to the prevention of falsified beef displays in Japan.
Authors:
Y Suekawa; H Aihara; M Araki; D Hosokawa; H Mannen; S Sasazaki
Publication Detail:
Type:  Journal Article     Date:  2010-01-18
Journal Detail:
Title:  Meat science     Volume:  85     ISSN:  1873-4138     ISO Abbreviation:  Meat Sci.     Publication Date:  2010 Jun 
Date Detail:
Created Date:  2010-04-08     Completed Date:  2010-07-14     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  101160862     Medline TA:  Meat Sci     Country:  England    
Other Details:
Languages:  eng     Pagination:  285-8     Citation Subset:  IM    
Copyright Information:
Copyright 2010 Elsevier Ltd. All rights reserved.
Affiliation:
Laboratory of Animal Breeding and Genetics, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
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MeSH Terms
Descriptor/Qualifier:
Animals
Breeding
Cattle / genetics*
Genetic Markers*
Genotype
Japan
Oligonucleotide Array Sequence Analysis / veterinary*
Polymorphism, Single Nucleotide / genetics*
United States
Chemical
Reg. No./Substance:
0/Genetic Markers

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


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