Document Detail


Dependence of tryptophan emission wavelength on conformation in cyclic hexapeptides.
MedLine Citation:
PMID:  16571015     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
The wavelength of maximum emission of tryptophan depends on the local electrostatic environment of the indole chromophore. The time-resolved emission spectra of seven rigid cyclic hexapeptides containing a single tryptophan residue were measured. The emission maxima of the three decay-associated spectra for the seven peptides ranged from 341 to 359 nm, suggesting that different tryptophan rotamers have different emission maxima even in the case of solvent-exposed tryptophans. This conclusion is supported by quantum mechanical/molecular dynamics simulations of the six canonical side chain rotamers of tryptophan in solvated hexapeptides. The calculated range of emission maxima for the tryptophan rotamers of the seven peptides is 344-365 nm. The precision of the wavelength calculations and the peptide, water, and charged side chain contributions to the spectral shifts are examined. The results indicate that the emission maxima of decay-associated spectra can aid in the assignment of fluorescence lifetimes to tryptophan rotamers.
Authors:
Chia-Pin Pan; Patrik R Callis; Mary D Barkley
Related Documents :
19796815 - Photosynthetic and fluorescence responses of solanum melangena l. to field application ...
20481545 - Fluorescence enhancement from individual plasmonic gap resonances.
11120885 - 2-aminopurine fluorescence quenching and lifetimes: role of base stacking.
39545 - The porphyrin pigmentation of subspecies of bacteroides melaninogenicus.
17155825 - First principles modeling of tunnel magnetoresistance of fe/mgo/fe trilayers.
17960035 - Feasibility of a low-energy x-ray free-electron laser.
Publication Detail:
Type:  Journal Article; Research Support, U.S. Gov't, Non-P.H.S.    
Journal Detail:
Title:  The journal of physical chemistry. B     Volume:  110     ISSN:  1520-6106     ISO Abbreviation:  J Phys Chem B     Publication Date:  2006 Apr 
Date Detail:
Created Date:  2006-03-30     Completed Date:  2007-07-31     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  101157530     Medline TA:  J Phys Chem B     Country:  United States    
Other Details:
Languages:  eng     Pagination:  7009-16     Citation Subset:  IM    
Affiliation:
Department of Chemistry, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, Ohio 44106, USA.
Export Citation:
APA/MLA Format     Download EndNote     Download BibTex
MeSH Terms
Descriptor/Qualifier:
Computer Simulation
Magnetic Resonance Spectroscopy
Models, Molecular
Peptides, Cyclic / chemistry*
Phosphotyrosine / chemistry
Protein Conformation
Spectrometry, Fluorescence
Tryptophan / chemistry*
Water / chemistry
Chemical
Reg. No./Substance:
0/Peptides, Cyclic; 21820-51-9/Phosphotyrosine; 73-22-3/Tryptophan; 7732-18-5/Water

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


Previous Document:  Ion current calculations based on three dimensional Poisson-Nernst-Planck theory for a cyclic peptid...
Next Document:  Evidence for many resolvable structures within conformation types of electrosprayed ubiquitin ions.