Document Detail


DNA barcoding common non-native freshwater fish species in Turkey: Low genetic diversity but high population structuring.
MedLine Citation:
PMID:  23298166     Owner:  NLM     Status:  Publisher    
Abstract/OtherAbstract:
Negative impacts of introduced non-native freshwater species on native species have been increasingly recognized in the world as well as in Turkey. However, there has been relatively little attention on genetic characterization of alien freshwater fishes in their non-native distribution range and virtually no study has been conducted in Turkey despite its crucial importance in invasion biology. The purpose of this study was to elucidate genetic diversity of common non-native freshwater fish species (Carassius auratus, Carassius gibelio, Gambusia holbrooki, Lepomis gibbosus, and Pseudorasbora parva) using mitochondrial Cytochrome c oxidase subunit I (COI) sequences; known as DNA barcodes. Through the whole dataset, seventeen haplotypes (haplotype diversity = 0.8908) were found containing 145 COI sequences. Mean Kimura two-parameter genetic distances were calculated as 0.209 for interspecific distance and 0.009 for intraspecific variation. COI barcode diversity among populations of the same species was found to be low, especially for C. gibelio, G. holbrooki, and L. gibbosus populations which were 0.5%, 0.6%, and 0.3%, respectively. Our results clearly demonstrate the effectiveness of the DNA barcoding approach both for identifications at species level and revealing intraspecific variation among populations, which could be used for effective management measures for invasive species and conservation strategies for indigenous and endemic species.
Authors:
Emre Keskin; Sevan Ağdamar; Ali Serhan Tarkan
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Publication Detail:
Type:  JOURNAL ARTICLE     Date:  2013-1-9
Journal Detail:
Title:  Mitochondrial DNA     Volume:  -     ISSN:  1940-1744     ISO Abbreviation:  Mitochondrial DNA     Publication Date:  2013 Jan 
Date Detail:
Created Date:  2013-1-9     Completed Date:  -     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  101487102     Medline TA:  Mitochondrial DNA     Country:  -    
Other Details:
Languages:  ENG     Pagination:  -     Citation Subset:  -    
Affiliation:
Department of Fisheries and Aquaculture, Agricultural Faculty, Ankara University , Ankara , Turkey.
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