Document Detail


Conformational preferences of 1-amino-2-phenylcyclohexanecarboxylic acid, a phenylalanine cyclohexane analogue.
MedLine Citation:
PMID:  19772338     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
The intrinsic conformational preferences of the restricted phenylalanine analogue generated by including the alpha and beta carbon atoms into a cyclohexane ring (1-amino-2-phenylcyclohexanecarboxylic acid, c(6)Phe) have been determined using quantum mechanical calculations. Specifically, the conformational profile of the N-acetyl-N'-methylamide derivative of the c(6)Phe stereoisomers exhibiting either a cis or a trans relative orientation between the amino and phenyl substituents has been analyzed in different environments (gas phase, chloroform, and aqueous solutions). Calculations were performed using B3LYP, MP2, and HF methods combined with the 6-31+G(d,p) and 6-311++G(d,p) basis sets, and a self-consistent reaction-field (SCRF) method was applied to analyze the influence of the solvent. The amino acids investigated can be viewed as constrained phenylalanine analogues with a rigidly oriented aromatic side chain that may interact with the peptide backbone not only sterically but also electronically through the aromatic pi orbitals. Their conformational propensities have been found to be strongly influenced by the specific orientation of the aromatic substituent in each stereoisomer and the conformation adopted by the cyclohexane ring, as well as by the environment.
Authors:
Carlos Alemán; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Jordi Casanovas
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Publication Detail:
Type:  Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't    
Journal Detail:
Title:  The Journal of organic chemistry     Volume:  74     ISSN:  1520-6904     ISO Abbreviation:  J. Org. Chem.     Publication Date:  2009 Oct 
Date Detail:
Created Date:  2009-10-09     Completed Date:  2009-12-29     Revised Date:  2013-05-31    
Medline Journal Info:
Nlm Unique ID:  2985193R     Medline TA:  J Org Chem     Country:  United States    
Other Details:
Languages:  eng     Pagination:  7834-43     Citation Subset:  IM    
Affiliation:
Departament d'Enginyeria Química, E. T. S. d'Enginyeria Industrial de Barcelona, Universitat Politècnica de Catalunya, Diagonal 647, Barcelona E-08028, Spain. carlos.aleman@upc.edu
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MeSH Terms
Descriptor/Qualifier:
Amines / chemistry*
Carboxylic Acids / chemistry*
Cyclohexanes / chemistry*
Molecular Conformation
Phenylalanine / chemistry*
Quantum Theory*
Grant Support
ID/Acronym/Agency:
N01 CO012400/CO/NCI NIH HHS; N01-CO-12400/CO/NCI NIH HHS
Chemical
Reg. No./Substance:
0/Amines; 0/Carboxylic Acids; 0/Cyclohexanes; 48K5MKG32S/Cyclohexane; 63-91-2/Phenylalanine
Comments/Corrections

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