Document Detail


Complete sequence and structure of the mitochondrial genome of the human tapeworm, Taenia asiatica (Platyhelminthes; Cestoda).
MedLine Citation:
PMID:  15977909     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
The complete Taenia asiatica mitochondrial genome was amplified by long extension polymerase chain reaction (long PCR) to yield overlapping fragments that were then completely sequenced. The whole mitochondrial genome was 13 703 bp long and contained 12 protein-encoding, 2 ribosomal RNA (small and large subunits), 22 transfer RNA genes and a short non-coding region. Thus, its gene contents are like those typically found in metazoan animal mitochondrial genomes (apart from the absence of atp8). All the genes were transcribed from the same strand. The 3' end 34 bp region of nad4L overlapped with the 5' end portion of nad4. The tRNA genes were 61-69 bp long, and the secondary structures of 18 tRNAs had typical clover-leaf shapes with paired DHU arms. However, trnC, trnS1, trnS2 and trnR had unpaired DHU arms that were 7-12 bp in length. The tRNAs that transferred serine lacked a DHU arm, as is also observed in a number of parasitic platyhelminths and metazoans. However, the trematode trnRs have paired DHU arms. The T. asiatica mtDNA non-coding region was like that in other cestodes since it was composed of a short non-coding region of 72 nucleotides and a long non-coding region of 176 nucleotides separated by a trnL1/, trnS2/, trnL2/, trnR/, nad5 gene cluster. The sequences of the cox1 genes between T. asiatica and T. saginata differ by 4.6%, while the T. asiatica cob gene differs by 4.1% and 12.9% from the cob genes of T. saginata and T. solium, respectively. In conclusion, the T. asiatica mitocondrial genome should provide a resource for comparative mitochondrial genomics and systematic studies of parasitic cestodes.
Authors:
H K Jeon; K H Lee; K H Kim; U W Hwang; K S Eom
Related Documents :
11319269 - Numerous gene rearrangements in the mitochondrial genome of the wallaby louse, heterodo...
16469069 - Extraordinary number of gene rearrangements in the mitochondrial genomes of lice (phthi...
15451509 - Evolution of the mitochondrial genome: protist connections to animals, fungi and plants.
21905949 - Trichophyton bullosum: a new zoonotic dermatophyte species.
9108139 - Gender-associated diverse mitochondrial dna molecules of the mussel mytilus californianus.
19030769 - Recoding of translation in turtle mitochondrial genomes: programmed frameshift mutation...
18713799 - Construction of a fully synthetic human scfv antibody library with cdr3 regions randomi...
23659909 - Identification of adenovirus-encoded small rnas by deep rna sequencing.
18716659 - The early antp gene repertoire: insights from the placozoan genome.
Publication Detail:
Type:  Journal Article; Research Support, Non-U.S. Gov't    
Journal Detail:
Title:  Parasitology     Volume:  130     ISSN:  0031-1820     ISO Abbreviation:  Parasitology     Publication Date:  2005 Jun 
Date Detail:
Created Date:  2005-06-27     Completed Date:  2005-08-09     Revised Date:  2006-11-15    
Medline Journal Info:
Nlm Unique ID:  0401121     Medline TA:  Parasitology     Country:  England    
Other Details:
Languages:  eng     Pagination:  717-26     Citation Subset:  IM    
Affiliation:
Department of Parasitology and Medical Research Institute, Chungbuk National University College of Medicine, Chongju, Chungbuk 361-763, South Korea.
Export Citation:
APA/MLA Format     Download EndNote     Download BibTex
MeSH Terms
Descriptor/Qualifier:
Animals
Base Sequence
Codon
DNA, Mitochondrial / chemistry*
Genome
Helminth Proteins / genetics
Humans
Molecular Sequence Data
Nucleic Acid Conformation
RNA, Transfer
Sequence Homology, Nucleic Acid
Taenia / genetics*
Chemical
Reg. No./Substance:
0/Codon; 0/DNA, Mitochondrial; 0/Helminth Proteins; 9014-25-9/RNA, Transfer

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


Previous Document:  Host specificity and the probability of discovering species of helminth parasites.
Next Document:  Clinical practice guidelines in nephrology: evaluation, classification, and stratification of chroni...