Document Detail


Characterization of DNA hybridization on partially aminated diamond by aromatic compounds.
MedLine Citation:
PMID:  17154611     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
Here, we report a novel method of micropatterning oligonucleotides via aromatic groups as linkers on partially amino-terminated diamond and the inherence on subsequent hybridization. The covalent immobilization of probe oligonucleotides and characterization of immobilized probe oligonucleotides with carboxylic compounds were investigated by X-ray photoelectron spectroscopy (XPS). To confirm the effects of linker flexibility in a low amino group on diamond for probe oligonucleotides, three kinds of dicarboxylic compound--adipic acid, terephthalic acid, and trimesic acid--were used for immobilization of probe oligonucleotides, like linkers; and these oligonucleotides were hybridized with target oligonucleotides labeled with Cy 5 on the micropatterned diamond surface. The hybridization intensities determined by epifluorescence microscopy were compared and analyzed.
Authors:
Jung-Hoon Yang; Kwang-Soup Song; Guo-Jun Zhang; Munenori Degawa; Yoshinori Sasaki; Iwao Ohdomari; Hiroshi Kawarada
Publication Detail:
Type:  Comparative Study; Journal Article; Research Support, Non-U.S. Gov't    
Journal Detail:
Title:  Langmuir : the ACS journal of surfaces and colloids     Volume:  22     ISSN:  0743-7463     ISO Abbreviation:  Langmuir     Publication Date:  2006 Dec 
Date Detail:
Created Date:  2006-12-12     Completed Date:  2007-01-26     Revised Date:  -    
Medline Journal Info:
Nlm Unique ID:  9882736     Medline TA:  Langmuir     Country:  United States    
Other Details:
Languages:  eng     Pagination:  11245-50     Citation Subset:  IM    
Affiliation:
School of Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan.
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MeSH Terms
Descriptor/Qualifier:
Carbocyanines / chemistry*
Cross-Linking Reagents / chemistry*
Diamond / chemistry*
Nucleic Acid Hybridization / methods
Oligonucleotide Array Sequence Analysis* / methods
Oligonucleotides / chemistry*
Spectrometry, Fluorescence / methods
Spectrometry, X-Ray Emission / methods
Chemical
Reg. No./Substance:
0/Carbocyanines; 0/Cross-Linking Reagents; 0/Oligonucleotides; 0/cyanine dye 5; 7782-40-3/Diamond

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


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