Document Detail


Catellatospora koreensis sp. nov., a novel actinomycete isolated from a gold-mine cave.
MedLine Citation:
PMID:  10843051     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
A new actinomycete strain, LM 042T, which was isolated from a gold-mine cave in Kongju, Republic of Korea, is described by phenotypic and genotypic characters. The organism formed short chains of non-motile spores and globose bodies from substrate mycelium. An aerial mycelium was absent. This organism was chemotaxonomically characterized by the presence of meso-diaminopimelic acid, rhamnose, xylose, glucose, mannose and ribose in whole-cell hydrolysates (a type II cell wall and a variant of sugar pattern D), a glycolyl type of muramic acid, DNA G+C content of 70.4 mol%, a type PII phospholipid pattern (phosphatidylethanolamine as a diagnostic nitrogenous phospholipid), a tetrahydrogenated menaquinone with 10 isoprene units as a major menaquinone, and fatty acid profiles predominated by iso-branched hexadecanoic acid, iso-branched pentadecanoic acid and heptadcenoic acid. A comparative analysis of 16S rDNA sequences indicated that this organism formed a distinct clade within the evolutionary radiation of the family Micromonosporaceae and clustered with members of the genus Catellatospora. The 16S rDNA similarity values between the isolate and its phylogenetic neighbours, the two subspecies of Catellatospora citrea and Catellatospora tsunoense, were 95.0-95.2% and 94.9%, respectively. An equidistant relationship was observed among the isolate, Catellatospora ferruginea and all other members of the Micromonosporaceae genera (levels of similarity 93.0-94.0%). The combination of physiological, chemotaxonomic and DNA-DNA hybridization data supported that this organism is a novel species of the genus Catellatospora, for which the name Catellatospora koreensis sp. nov. is proposed. The type strain is LM 042T (= IMSNU 50729T).
Authors:
S D Lee; S O Kang; Y C Hah
Publication Detail:
Type:  Journal Article; Research Support, Non-U.S. Gov't    
Journal Detail:
Title:  International journal of systematic and evolutionary microbiology     Volume:  50 Pt 3     ISSN:  1466-5026     ISO Abbreviation:  Int. J. Syst. Evol. Microbiol.     Publication Date:  2000 May 
Date Detail:
Created Date:  2000-10-19     Completed Date:  2000-10-19     Revised Date:  2006-11-15    
Medline Journal Info:
Nlm Unique ID:  100899600     Medline TA:  Int J Syst Evol Microbiol     Country:  ENGLAND    
Other Details:
Languages:  eng     Pagination:  1103-11     Citation Subset:  IM    
Affiliation:
Department of Microbiology, College of Natural Sciences and Research Center for Molecular Microbiology, Seoul National University, Republic of Korea.
Data Bank Information
Bank Name/Acc. No.:
GENBANK/AF171700
Export Citation:
APA/MLA Format     Download EndNote     Download BibTex
MeSH Terms
Descriptor/Qualifier:
Actinomycetales / classification*,  genetics,  isolation & purification,  physiology
Base Composition
DNA, Bacterial / chemistry,  genetics
DNA, Ribosomal / chemistry,  genetics
Fatty Acids / analysis
Gold*
Mining*
Molecular Sequence Data
Nucleic Acid Hybridization
Phenotype
Phylogeny
RNA, Ribosomal, 16S / genetics
Sequence Analysis, DNA
Soil Microbiology*
Chemical
Reg. No./Substance:
0/DNA, Bacterial; 0/DNA, Ribosomal; 0/Fatty Acids; 0/RNA, Ribosomal, 16S; 7440-57-5/Gold

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine


Previous Document:  DNA-DNA hybridization determined in micro-wells using covalent attachment of DNA.
Next Document:  Emendation of the description of Blastomonas natatoria (Sly 1985) Sly and Cahill 1997 as an aerobic ...