| BioDWH: a data warehouse kit for life science data integration. | |
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MedLine Citation:
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PMID: 20134070 Owner: NLM Status: MEDLINE |
Abstract/OtherAbstract:
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This paper presents a novel bioinformatics data warehouse software kit that integrates biological information from multiple public life science data sources into a local database management system. It stands out from other approaches by providing up-to-date integrated knowledge, platform and database independence as well as high usability and customization. This open source software can be used as a general infrastructure for integrative bioinformatics research and development. The advantages of the approach are realized by using a Java-based system architecture and object-relational mapping (ORM) technology. Finally, a practical application of the system is presented within the emerging area of medical bioinformatics to show the usefulness of the approach. The BioDWH data warehouse software is available for the scientific community at http://sourceforge.net/projects/biodwh/. |
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Authors:
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Thoralf T?pel; Benjamin Kormeier; Andreas Klassen; Ralf Hofest?dt |
Publication Detail:
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Type: Journal Article; Research Support, Non-U.S. Gov't Date: 2008-08-25 |
Journal Detail:
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Title: Journal of integrative bioinformatics Volume: 5 ISSN: 1613-4516 ISO Abbreviation: J Integr Bioinform Publication Date: 2008 |
Date Detail:
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Created Date: 2010-02-05 Completed Date: 2010-05-19 Revised Date: - |
Medline Journal Info:
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Nlm Unique ID: 101503361 Medline TA: J Integr Bioinform Country: Germany |
Other Details:
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Languages: eng Pagination: - Citation Subset: IM |
Affiliation:
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Bielefeld University, Bioinformatics Department, PO Box 100131, D-33501 Bielefeld, Germany. |
Export Citation:
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| MeSH Terms | |
Descriptor/Qualifier:
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Database Management Systems Databases, Factual* Information Storage and Retrieval / methods* Internet Software* |
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine
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