Document Detail


Association of genomic loci from a cardiovascular gene SNP array with fibrinogen levels in European Americans and African-Americans from six cohort studies: the Candidate Gene Association Resource (CARe).
MedLine Citation:
PMID:  20978265     Owner:  NLM     Status:  MEDLINE    
Abstract/OtherAbstract:
Several common genomic loci, involving various immunity- and metabolism-related genes, have been associated with plasma fibrinogen in European Americans (EAs). The genetic determinants of fibrinogen in African Americans (AAs) are poorly characterized. Using a vascular gene-centric array in 23,634 EA and 6657 AA participants from 6 studies comprising the Candidate Gene Association Resource project, we examined the association of 47,539 common and lower frequency variants with fibrinogen concentration. We identified a rare Pro265Leu variant in FGB (rs6054) associated with lower fibrinogen. Common fibrinogen gene single nucleotide polymorphisms (FGB rs1800787 and FGG rs2066861) significantly associated with fibrinogen in EAs were prevalent in AAs and showed consistent associations. Several fibrinogen locus single nucleotide polymorphism associated with lower fibrinogen were exclusive to AAs; these include a newly reported association with FGA rs10050257. For IL6R, IL1RN, and NLRP3 inflammatory gene loci, associations with fibrinogen were concordant between EAs and AAs, but not at other loci (CPS1, PCCB, and SCL22A5-IRF1). The association of FGG rs2066861 with fibrinogen differed according to assay type used to measure fibrinogen. Further characterization of common and lower-frequency genetic variants that contribute to interpopulation differences in fibrinogen phenotype may help refine our understanding of the contribution of hemostasis and inflammation to atherothrombotic risk.
Authors:
Christina L Wassel; Leslie A Lange; Brendan J Keating; Kira C Taylor; Andrew D Johnson; Cameron Palmer; Lindsey A Ho; Nicholas L Smith; Ethan M Lange; Yun Li; Qiong Yang; Joseph A Delaney; Weihong Tang; Geoffrey Tofler; Susan Redline; Herman A Taylor; James G Wilson; Russell P Tracy; David R Jacobs; Aaron R Folsom; David Green; Christopher J O'Donnell; Alexander P Reiner
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Publication Detail:
Type:  Journal Article; Research Support, N.I.H., Extramural     Date:  2010-10-26
Journal Detail:
Title:  Blood     Volume:  117     ISSN:  1528-0020     ISO Abbreviation:  Blood     Publication Date:  2011 Jan 
Date Detail:
Created Date:  2011-01-07     Completed Date:  2011-02-24     Revised Date:  2013-07-03    
Medline Journal Info:
Nlm Unique ID:  7603509     Medline TA:  Blood     Country:  United States    
Other Details:
Languages:  eng     Pagination:  268-75     Citation Subset:  AIM; IM    
Affiliation:
University of California, San Diego, CA, USA.
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MeSH Terms
Descriptor/Qualifier:
Adult
African Americans / genetics*
Aged
Cardiovascular Diseases / blood,  ethnology*,  genetics*
Cohort Studies
European Continental Ancestry Group / genetics*
Female
Fibrinogen / genetics*
Genetic Predisposition to Disease
Haplotypes / genetics
Humans
Male
Middle Aged
Phenotype
Polymorphism, Single Nucleotide / genetics*
Risk Factors
Grant Support
ID/Acronym/Agency:
5215810-55000000041//PHS HHS; HHSN268200625226C//PHS HHS; HL073410/HL/NHLBI NIH HHS; HL095080/HL/NHLBI NIH HHS; R01 HL71862-06/HL/NHLBI NIH HHS
Chemical
Reg. No./Substance:
9001-32-5/Fibrinogen
Comments/Corrections

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